| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g45730.1 |
| Family | CE8 |
| Protein Properties | Length: 504 Molecular Weight: 53496.3 Isoelectric Point: 9.2146 |
| Chromosome | Chromosome/Scaffold: 11 Start: 27660456 End: 27662609 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 129 | 418 | 0 |
| GDTTFTTITAALEKVPEGNKKRVILDLKPGAEFREKIFLNLSKPFITFKSDPKNPAVIAWSDTAATRGKDGKPVGTVGSTTVAIESDYFVAHGVVFKNDA PMAKPGAEGGQAVALRLFGTKAAIYNCTIDGGQDTLYDHKGLHYIKDCLIMGSVDFIFGFGRSYYEGCTIVSVTKEVSVLTAQQRSKTIEGALESGFSFK NCSIKGEGQIYLGRAWGESSRVVYAYTDMSKEVVPVGWDGWNIAKPESSGIYYGEFKCTGPGSDAKKRVGWALDLTEEQAKPFIGTHYIY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 504 Download |
| MIEARKKKKK KLQLQQQQQQ LVTNKVMTMD RPNVAVAAVG LLVAAVAATL PAPSWGQQQP 60 ANKLITSTSG SGKGLSKWLA MNQEEYVEKK ALHTMATAEE LGGKKLDANL TAAEEAKVTW 120 VIDPKGTPGD TTFTTITAAL EKVPEGNKKR VILDLKPGAE FREKIFLNLS KPFITFKSDP 180 KNPAVIAWSD TAATRGKDGK PVGTVGSTTV AIESDYFVAH GVVFKNDAPM AKPGAEGGQA 240 VALRLFGTKA AIYNCTIDGG QDTLYDHKGL HYIKDCLIMG SVDFIFGFGR SYYEGCTIVS 300 VTKEVSVLTA QQRSKTIEGA LESGFSFKNC SIKGEGQIYL GRAWGESSRV VYAYTDMSKE 360 VVPVGWDGWN IAKPESSGIY YGEFKCTGPG SDAKKRVGWA LDLTEEQAKP FIGTHYIYGD 420 SWLIPPDGTS TSSSSASTSS NSTAEAPTAS SNSTASANKK ESNSTAEAPT ATSYSTASAT 480 TSNSTASAKA TNYSSSSPPA KGK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 7.0e-78 | 138 | 427 | 298 | + probable pectinesterase | ||
| PLN02634 | PLN02634 | 1.0e-83 | 138 | 427 | 290 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 9.0e-85 | 139 | 423 | 288 | + pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-104 | 138 | 425 | 288 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 2.0e-104 | 106 | 426 | 323 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0005737 | cytoplasm |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA95297.2 | 0 | 1 | 503 | 1 | 503 | Pectinesterase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABA95298.2 | 0 | 1 | 483 | 1 | 483 | Pectinesterase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAZ19254.1 | 0 | 1 | 427 | 1 | 427 | hypothetical protein OsJ_34791 [Oryza sativa Japonica Group] |
| RefSeq | NP_001068464.1 | 0 | 71 | 500 | 42 | 463 | Os11g0683700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001068465.1 | 0 | 81 | 503 | 1 | 423 | Os11g0683800 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6e-31 | 129 | 423 | 15 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 6e-27 | 129 | 423 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.000000000000002 | 127 | 300 | 38 | 219 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.000000000000002 | 132 | 300 | 17 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.000000000000002 | 132 | 300 | 17 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
