| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g47350.1 |
| Family | GH3 |
| Protein Properties | Length: 817 Molecular Weight: 88758.6 Isoelectric Point: 6.6346 |
| Chromosome | Chromosome/Scaffold: 11 Start: 28483676 End: 28486502 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 104 | 373 | 0 |
| AARIGLPAYRWWSEALHGLSSTGPTTKFDDLATPHLHSGVSAVYNATVFANVINSAASFNETLWKSIGQAVSTEARAMYNMGKGGLTYWSPNINVVRDPR WGRALETPGEDPYVVGRYAVNFVRGMQDIPGHEAVAAGGDPNTRPLKTSACCKHYAAYDLDDWHNHTRFEFDARVDERDMVETFQRPFEMCVRDGDVSSV MCSYNRVNGIPACADARLLSQTIRRDWGLHGYIVSDCDAVRVMTDNATWLGYTGAEASAAALKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 817 Download |
| MASSSSPSHL HLLILFFFAI AASSLLSTAT STRASPADTA VGGIAAKVYT KVCDATRFAG 60 LGLNMTEFRY CDASLPYADR VRDLIGRMTV EEKVGALGDW TDGAARIGLP AYRWWSEALH 120 GLSSTGPTTK FDDLATPHLH SGVSAVYNAT VFANVINSAA SFNETLWKSI GQAVSTEARA 180 MYNMGKGGLT YWSPNINVVR DPRWGRALET PGEDPYVVGR YAVNFVRGMQ DIPGHEAVAA 240 GGDPNTRPLK TSACCKHYAA YDLDDWHNHT RFEFDARVDE RDMVETFQRP FEMCVRDGDV 300 SSVMCSYNRV NGIPACADAR LLSQTIRRDW GLHGYIVSDC DAVRVMTDNA TWLGYTGAEA 360 SAAALKAGLD LDCGESWKND TDGHPLMDFL TTYGMEAVNK GKMRESDIDN ALTNQYMTLM 420 RLGYFDDIAQ YSSLGRQDIC TDQHKTLALD GARQGIVLLK NDNKLLPLDA NKVGFVNVRG 480 PHVQAPEKIM DGDYTGPPCR YVTPRQGVSK YVRFSHRANT TIYFGGLNLN IEREGNDRED 540 ILLPKNQTEE IIRVAKASPN PIILVILSGG GIDVSFAQNN PKIGAILWAG YPGGEGGNAI 600 ADVIFGKHNP SGRLPLTWFK NKYIYQLPMT SMDLRPVAKH GYPGRTYKFY DGPDVLYPFG 660 YGLSYTKFLY EMGTNGTALI VPVAGGHCKK LSYKSGVSTA PACPAINVNG HVCTETVSFN 720 VSVTNGGDTG GSHPVIVFSK PPAEVDDAPM KQVVAFKSVF VPAWSTVSVS FELNVCKAFG 780 IVEKTAYTVV PSGVSTILVE NVDSSVSFPV KIDFAI* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-32 | 88 | 495 | 429 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-37 | 480 | 666 | 216 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 5.0e-48 | 84 | 414 | 332 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 4.0e-49 | 51 | 775 | 828 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 66 | 807 | 777 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY81859.1 | 0 | 1 | 816 | 1 | 816 | hypothetical protein OsI_37025 [Oryza sativa Indica Group] |
| RefSeq | NP_001068511.1 | 0 | 1 | 816 | 1 | 816 | Os11g0696400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146482.1 | 0 | 47 | 816 | 57 | 835 | hypothetical protein LOC100280070 [Zea mays] |
| RefSeq | XP_002437062.1 | 0 | 31 | 816 | 22 | 809 | hypothetical protein SORBIDRAFT_10g020500 [Sorghum bicolor] |
| RefSeq | XP_002455502.1 | 0 | 49 | 816 | 47 | 825 | hypothetical protein SORBIDRAFT_03g012290 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 81 | 773 | 7 | 696 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3u48_A | 0 | 81 | 773 | 7 | 696 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3u4a_B | 0 | 81 | 773 | 7 | 696 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3u4a_A | 0 | 81 | 773 | 7 | 696 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 2x41_A | 5e-35 | 79 | 756 | 2 | 656 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
