| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os11g47820.2 |
| Family | CBM43 |
| Protein Properties | Length: 432 Molecular Weight: 45956.2 Isoelectric Point: 6.3963 |
| Chromosome | Chromosome/Scaffold: 11 Start: 28838673 End: 28842809 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 212 | 313 | 2.1e-32 |
| MMDAIYTAMKRLGYGDVDIAVGEAGWPTQADPGQVGVGVEEARDFNEGMLRVVSSGKGTPLMPNRKFETYIFSLFDENQKPGPIAEKHFGILNPDFTPIY DL | |||
| CBM43 | 347 | 428 | 1.3e-32 |
| WCVPKAGASDTDLQNNINYACGYVDCKPIQSGGACFDPNNVQSHAAFVMNAFYQANGRHDYDCDFKGTGAVTSNDPSYGSCK | |||
| GH17 | 36 | 215 | 0 |
| VGVNYGANADNLPPPKDVAAFLAAHTTIDRVKLFDANPAFISAFANTPISLAVSLPNSDLPSLADKQTGLDTARAWVRANLSPYVPATNVTLLLAGNEIL LSPDPNLVLSLLPAMRRLAQALRLEGLTGVRVTTPHYLGILAPSDGIPSNARFRPGYDTKLFPPMLQFHRDTGSPFMMDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 432 Download |
| MRNLHPPMMK MLLAALVVVA AASFRAAEAA LPSMAVGVNY GANADNLPPP KDVAAFLAAH 60 TTIDRVKLFD ANPAFISAFA NTPISLAVSL PNSDLPSLAD KQTGLDTARA WVRANLSPYV 120 PATNVTLLLA GNEILLSPDP NLVLSLLPAM RRLAQALRLE GLTGVRVTTP HYLGILAPSD 180 GIPSNARFRP GYDTKLFPPM LQFHRDTGSP FMMDAIYTAM KRLGYGDVDI AVGEAGWPTQ 240 ADPGQVGVGV EEARDFNEGM LRVVSSGKGT PLMPNRKFET YIFSLFDENQ KPGPIAEKHF 300 GILNPDFTPI YDLGLLRQSS DSGAPNPSPN PSPNPSPKPA PSGGGKWCVP KAGASDTDLQ 360 NNINYACGYV DCKPIQSGGA CFDPNNVQSH AAFVMNAFYQ ANGRHDYDCD FKGTGAVTSN 420 DPSYGSCKYV S* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-23 | 347 | 415 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-41 | 347 | 429 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-60 | 36 | 313 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX95270.1 | 0 | 1 | 431 | 1 | 472 | glucan endo-1,3-beta-glucosidase precursor (ec 3.2.1.39) ((1-3)-beta-glucan endohydrolase) ((1-3)-beta-glucanase) (beta-1,3-endoglucanase) [Oryza sativa Japonica Group] |
| GenBank | EEC68648.1 | 0 | 1 | 431 | 1 | 472 | hypothetical protein OsI_37085 [Oryza sativa Indica Group] |
| GenBank | EEE52578.1 | 0 | 1 | 322 | 1 | 363 | hypothetical protein OsJ_34867 [Oryza sativa Japonica Group] |
| GenBank | EEE52578.1 | 0 | 1 | 431 | 371 | 842 | hypothetical protein OsJ_34867 [Oryza sativa Japonica Group] |
| RefSeq | NP_001068545.1 | 0 | 1 | 431 | 1 | 431 | Os11g0704600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 1e-34 | 36 | 315 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 1e-34 | 36 | 315 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 1e-34 | 36 | 315 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 1e-34 | 36 | 315 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 8e-34 | 36 | 315 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
