| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os12g02520.1 |
| Family | GH5 |
| Protein Properties | Length: 373 Molecular Weight: 41839.2 Isoelectric Point: 4.6173 |
| Chromosome | Chromosome/Scaffold: 12 Start: 858268 End: 860498 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 12 | 345 | 2.1e-38 |
| SGRPFIIHGFNTYWLMSFAADQATRPRVTAAIAEAAEAGLNVCRTWAFSDGGYRALQTVPFHYDEDVFQALDFVVSEAKRHNMRLILSLCNNWEDYGGKA QYVRWGKEAGLDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGIEG FYGLSTPELLPVNPDEYSGHAGTDFIRNHQAPGIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDAANLLGMPIVVGEFGVSVKDGKFGNEFREDF MKTVYRIFLSSWKEGVIGGGCLLWQLFPEGAEHM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 373 Download |
| MVECSGTQLW ASGRPFIIHG FNTYWLMSFA ADQATRPRVT AAIAEAAEAG LNVCRTWAFS 60 DGGYRALQTV PFHYDEDVFQ ALDFVVSEAK RHNMRLILSL CNNWEDYGGK AQYVRWGKEA 120 GLDLTSEDDF FSDPTIKSYY KAFVEAVVTR INTVTNETYK DDPTILAWEL INEPRCPSDP 180 SGDTLQAWIE EMASYVKSID PVHLLEIGIE GFYGLSTPEL LPVNPDEYSG HAGTDFIRNH 240 QAPGIDLASI HVYSDTWLPH SIKENHLQFV DKWMQQHIHD AANLLGMPIV VGEFGVSVKD 300 GKFGNEFRED FMKTVYRIFL SSWKEGVIGG GCLLWQLFPE GAEHMDDGYA VIFAKSPSTL 360 SLLANHLRCL EC* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0006 | 157 | 253 | 108 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 4.0e-12 | 11 | 313 | 313 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 2.0e-28 | 79 | 357 | 289 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ19452.1 | 0 | 1 | 372 | 1 | 369 | hypothetical protein OsJ_35013 [Oryza sativa Japonica Group] |
| GenBank | EEC68738.1 | 0 | 1 | 372 | 40 | 411 | hypothetical protein OsI_37245 [Oryza sativa Indica Group] |
| GenBank | EEE52650.1 | 0 | 1 | 372 | 11 | 382 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q0IQJ7 | 0 | 1 | 372 | 1 | 372 | MAN8_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 8; AltName: Full=Beta-mannanase 8; AltName: Full=Endo-beta-1,4-mannanase 8; AltName: Full=OsMAN8 |
| Swiss-Prot | Q2RBB1 | 0 | 1 | 372 | 11 | 379 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 1 | 363 | 6 | 362 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 12 | 296 | 23 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 12 | 296 | 23 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 12 | 296 | 23 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 12 | 296 | 23 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT747977 | 293 | 1 | 293 | 0 |
| CB624099 | 202 | 172 | 373 | 0 |
| HX195966 | 238 | 2 | 237 | 0 |
| CA767350 | 195 | 179 | 373 | 0 |
| JK987915 | 289 | 1 | 289 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
