| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os12g03470.1 |
| Family | GH51 |
| Protein Properties | Length: 686 Molecular Weight: 75438.9 Isoelectric Point: 5.2457 |
| Chromosome | Chromosome/Scaffold: 12 Start: 1360144 End: 1366649 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 207 | 675 | 0 |
| LASSTIPVSGASNWTKLEQKLVAKGTNRTSRLQITTTKKGVVWFDQVSLMSADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRWRESIG PWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAAIAPFVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFPVKYVAIGN EDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDASSRPLDHPADLYDFHVYTDSKTLFSMKSAFDRSSRNGPKAFVSEYAVWRSDAGRGSLLASLAEAAF LTGLEKNSDVVQMASYAPLFVNNNDQTWNPDAIVFNSWQQYGTPSYWMQTLFRESSGAMFHPITITSSYSGSLAASAITWQDSENSFLRVKIINFGSDPV SLTISATGLQARVNALGSTATVITSSNVMDENSFSNPNKVVPVKSQLSNAAEQMQVTLAPHSFSSFDLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 686 Download |
| MHTVSSSGLI CSTDTRPALV FTAPSMGSRE PFLSAIFFFF FLLLFCLGCK CIASELHLHT 60 TQTAVLKVDA SLQHARQIPD TLFGIFFEEI NHAGAGGIWA ELVSNRGFEA GGPHTPSNID 120 PWSIIGDDSS IFVATDRTSC FSRNTVALRM EVLCDNCPAG GVGIYNPGFW GMNIEDGKTY 180 NLVMYVKSPE TVELTVSLTS SDGSQNLASS TIPVSGASNW TKLEQKLVAK GTNRTSRLQI 240 TTTKKGVVWF DQVSLMSADT YKGHGFRTEL ISMMLDLKPR FLRFPGGCFV EGEWLRNAFR 300 WRESIGPWEE RPGHFGDVWH YWTDDGLGYY EFLQLSEDLG AAPIWVFNNG ISHNDEVDTA 360 AIAPFVKDVL DSLEFARGSA DSTWGSVRAA MGHPEPFPVK YVAIGNEDCG KKFYRGNYLK 420 FYNAIREAYP DIQMISNCDA SSRPLDHPAD LYDFHVYTDS KTLFSMKSAF DRSSRNGPKA 480 FVSEYAVWRS DAGRGSLLAS LAEAAFLTGL EKNSDVVQMA SYAPLFVNNN DQTWNPDAIV 540 FNSWQQYGTP SYWMQTLFRE SSGAMFHPIT ITSSYSGSLA ASAITWQDSE NSFLRVKIIN 600 FGSDPVSLTI SATGLQARVN ALGSTATVIT SSNVMDENSF SNPNKVVPVK SQLSNAAEQM 660 QVTLAPHSFS SFDLALAQSK LVAEM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 4.0e-34 | 265 | 670 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 8.0e-37 | 483 | 668 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 4.0e-50 | 483 | 668 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC67598.1 | 0 | 26 | 685 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| GenBank | EEC68793.1 | 0 | 26 | 685 | 1 | 657 | hypothetical protein OsI_37345 [Oryza sativa Indica Group] |
| GenBank | EEE52698.1 | 0 | 26 | 675 | 1 | 648 | hypothetical protein OsJ_35098 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065660.1 | 0 | 26 | 685 | 1 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066062.1 | 0 | 26 | 685 | 1 | 660 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 2e-22 | 265 | 676 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 2e-22 | 265 | 676 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 2e-22 | 265 | 676 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 2e-22 | 265 | 676 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 2e-22 | 265 | 676 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
