| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os12g03470.2 |
| Family | GH51 |
| Protein Properties | Length: 661 Molecular Weight: 72878 Isoelectric Point: 5.1511 |
| Chromosome | Chromosome/Scaffold: 12 Start: 1359586 End: 1366649 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 182 | 650 | 0 |
| LASSTIPVSGASNWTKLEQKLVAKGTNRTSRLQITTTKKGVVWFDQVSLMSADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRWRESIG PWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAAIAPFVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFPVKYVAIGN EDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDASSRPLDHPADLYDFHVYTDSKTLFSMKSAFDRSSRNGPKAFVSEYAVWRSDAGRGSLLASLAEAAF LTGLEKNSDVVQMASYAPLFVNNNDQTWNPDAIVFNSWQQYGTPSYWMQTLFRESSGAMFHPITITSSYSGSLAASAITWQDSENSFLRVKIINFGSDPV SLTISATGLQARVNALGSTATVITSSNVMDENSFSNPNKVVPVKSQLSNAAEQMQVTLAPHSFSSFDLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 661 Download |
| MGSREPFLSA IFFFFFLLLF CLGCKCIASE LHLHTTQTAV LKVDASLQHA RQIPDTLFGI 60 FFEEINHAGA GGIWAELVSN RGFEAGGPHT PSNIDPWSII GDDSSIFVAT DRTSCFSRNT 120 VALRMEVLCD NCPAGGVGIY NPGFWGMNIE DGKTYNLVMY VKSPETVELT VSLTSSDGSQ 180 NLASSTIPVS GASNWTKLEQ KLVAKGTNRT SRLQITTTKK GVVWFDQVSL MSADTYKGHG 240 FRTELISMML DLKPRFLRFP GGCFVEGEWL RNAFRWRESI GPWEERPGHF GDVWHYWTDD 300 GLGYYEFLQL SEDLGAAPIW VFNNGISHND EVDTAAIAPF VKDVLDSLEF ARGSADSTWG 360 SVRAAMGHPE PFPVKYVAIG NEDCGKKFYR GNYLKFYNAI REAYPDIQMI SNCDASSRPL 420 DHPADLYDFH VYTDSKTLFS MKSAFDRSSR NGPKAFVSEY AVWRSDAGRG SLLASLAEAA 480 FLTGLEKNSD VVQMASYAPL FVNNNDQTWN PDAIVFNSWQ QYGTPSYWMQ TLFRESSGAM 540 FHPITITSSY SGSLAASAIT WQDSENSFLR VKIINFGSDP VSLTISATGL QARVNALGST 600 ATVITSSNVM DENSFSNPNK VVPVKSQLSN AAEQMQVTLA PHSFSSFDLA LAQSKLVAEM 660 * 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 7.0e-34 | 240 | 645 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 6.0e-37 | 458 | 643 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 3.0e-50 | 458 | 643 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC67598.1 | 0 | 1 | 660 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| GenBank | EEC68793.1 | 0 | 1 | 660 | 1 | 657 | hypothetical protein OsI_37345 [Oryza sativa Indica Group] |
| GenBank | EEE52698.1 | 0 | 1 | 650 | 1 | 648 | hypothetical protein OsJ_35098 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065660.1 | 0 | 1 | 660 | 1 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066062.1 | 0 | 1 | 660 | 1 | 660 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 2e-22 | 240 | 651 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 2e-22 | 240 | 651 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 2e-22 | 240 | 651 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 2e-22 | 240 | 651 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 2e-22 | 240 | 651 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
