| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os12g03530.1 |
| Family | GH51 |
| Protein Properties | Length: 571 Molecular Weight: 63665 Isoelectric Point: 4.6529 |
| Chromosome | Chromosome/Scaffold: 12 Start: 1397392 End: 1404943 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 192 | 443 | 0 |
| RGVIWFDQVSLMPSDTYKGHGFRKELIYMLLELRPQFLRFPGISHHDEVDTIIIEPFVKDVLDSLEFARGSAESTWGSVRSAMGHPERFPLKYVAIGNED CGKEFYRGNYLKFYDAIRKAYPDIQMISNCDGSSRPLDHPADLYDFHVYTSAANLFIMKNKFDRTSRIGPKVFVSEYAVNEQRDAGKGSLLASLAEAAFL TGLEKNSDVVQMASYAPLFVNDNDSTWNPDAIVFNSWQQYGTPSYWVQTYFR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 571 Download |
| MGSKDAFFCT FCSLLLFCFS SKCLSSELDL PQTALVEVDA SWEVSRKIPD TLFGLFFEEI 60 NHAGAGGIWA ELVSNRSNSQ FDKHSSWKLK NSVALRMEIL CENCPAGGVG IYNPGFWGMN 120 IEEGKTYNLV MYIRSLESVE LTASLTCSDG MQNLASVSIQ EIDPSNWTKI EMQLLAQGTC 180 RTSRLELTSM KRGVIWFDQV SLMPSDTYKG HGFRKELIYM LLELRPQFLR FPGISHHDEV 240 DTIIIEPFVK DVLDSLEFAR GSAESTWGSV RSAMGHPERF PLKYVAIGNE DCGKEFYRGN 300 YLKFYDAIRK AYPDIQMISN CDGSSRPLDH PADLYDFHVY TSAANLFIMK NKFDRTSRIG 360 PKVFVSEYAV NEQRDAGKGS LLASLAEAAF LTGLEKNSDV VQMASYAPLF VNDNDSTWNP 420 DAIVFNSWQQ YGTPSYWVQT YFRESSGSVI HPITISSRYS DSLAASAITW QDSEDIFLRV 480 KIVNFGPNAV NLTISSRGLQ DGVNTAKSTV TVLTSGNFLD ENSFSEPNKV VPVESELPNA 540 AEVMEAVLPP FSFTSFDLAL DQYSKLVAEM * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 2.0e-12 | 212 | 552 | 462 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-36 | 392 | 552 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 6.0e-49 | 366 | 552 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA96378.2 | 0 | 1 | 570 | 1 | 570 | arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAZ17308.1 | 0 | 30 | 570 | 1 | 513 | hypothetical protein OsJ_32831 [Oryza sativa Japonica Group] |
| GenBank | EEC68797.1 | 0 | 210 | 570 | 2 | 389 | hypothetical protein OsI_37351 [Oryza sativa Indica Group] |
| GenBank | EEC76915.1 | 0 | 1 | 562 | 1 | 616 | hypothetical protein OsI_15162 [Oryza sativa Indica Group] |
| GenBank | EEE60649.1 | 0 | 1 | 562 | 174 | 789 | hypothetical protein OsJ_14094 [Oryza sativa Japonica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 0.00000001 | 251 | 561 | 133 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 0.00000001 | 251 | 561 | 133 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 0.00000001 | 251 | 561 | 133 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 0.00000001 | 251 | 561 | 133 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 0.00000001 | 251 | 561 | 133 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
