CAZyme Information

Basic Information
SpeciesOryza sativa
Cazyme IDLOC_Os12g21789.2
FamilyGH43
Protein PropertiesLength: 467 Molecular Weight: 53212.9 Isoelectric Point: 6.46
ChromosomeChromosome/Scaffold: 12 Start: 12264653 End: 12268289
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431603852e-34
  TETYFWYGENKDGKTYKAHSKGADRVDIVGVSCYSSKDLWTWRNEGVVLRGEKKNVTHDLHKSNVLERPKVIYNDRTGKYVMWMHIDDTNYTKASVGVAI
  SDSPTGPFSYLYSKQPHDCESRDMTIFKDDNGKAYLIYSSEDNSELHIGQLTDDYLDVTDNMRRLLIAQHREAPALFKYEGTYYMITSGCTGWAPNTALA
  HAATAIMGPWETLGNPCVGGNDIFRS
Full Sequence
Protein Sequence     Length: 467     Download
MGLRSKQPKA LAFRCYAASH RSLTLAVWSL AALVVVVNFH LLIIHKEDES TSIHEINRSI    60
VSELEEVEEE KFRVSPPRSR RNPRAVRRKG EQKPPSVVDE FLDESSAVHD MFFPERNMAI    120
DPINGGNDSM YFYYPGRVWL DTDGNPIQAH GGGVLYDEKT ETYFWYGENK DGKTYKAHSK    180
GADRVDIVGV SCYSSKDLWT WRNEGVVLRG EKKNVTHDLH KSNVLERPKV IYNDRTGKYV    240
MWMHIDDTNY TKASVGVAIS DSPTGPFSYL YSKQPHDCES RDMTIFKDDN GKAYLIYSSE    300
DNSELHIGQL TDDYLDVTDN MRRLLIAQHR EAPALFKYEG TYYMITSGCT GWAPNTALAH    360
AATAIMGPWE TLGNPCVGGN DIFRSTTFFS QSTFVLPIPG LSGSFIFMAD RWSPSELRDS    420
RYVWLPLTVG GLPDEAADYS FMFPLWSRVS IYWHRRWRLP EGWRDS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd09004GH43_bXyl8.0e-18191374193+
cd08990GH43_AXH_like1.0e-19192370192+
cd08978GH_F1.0e-39161427278+
cd08985GH43_64.0e-118147429284+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005575cellular_component
GO:0005975carbohydrate metabolic process
GO:0016787hydrolase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEEC69140.101466353818hypothetical protein OsI_38068 [Oryza sativa Indica Group]
GenBankEEE53089.101466299764hypothetical protein OsJ_35850 [Oryza sativa Japonica Group]
RefSeqNP_001066630.1014661466Os12g0406100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001151925.1014661467glycosyl hydrolase, family 43 protein [Zea mays]
RefSeqXP_002468324.1014661467hypothetical protein SORBIDRAFT_01g043810 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F013645145346A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum
PDB3vt2_E013645145346A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum
PDB3vt2_D013645145346A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum
PDB3vt2_C013645145346A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum
PDB3vt2_B013645145346A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum
Transmembrane Domains
StartEnd
2244
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8017533011674670
GO8561533321334640
JG918498278893660
JG8646842761814560
JG9370722511333830
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny