y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os12g23170.1 |
Family | GH1 |
Protein Properties | Length: 493 Molecular Weight: 57003.7 Isoelectric Point: 7.7759 |
Chromosome | Chromosome/Scaffold: 12 Start: 13099648 End: 13102786 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 28 | 490 | 0 |
RETFPAGFVFGTASSAYQVEGNALQYGRGPCIWDTFLMQPGVTPDNSTANVTVDEYHRYMDDVDNMVRVGFDAYRFSISWSRIFPSGLGKINKDGVDYYH RLIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANHGYGDGFFPPGRCTGCQPGGNSATEPYIA AHNLLLSHAAAVRTYRDKYQAIQKGKIGILLDFVWYEPLTDKEEDHAAAHRAREFTLGWYLHPITYGHYPETMQNAVKERLPNFTREQSEMIKGSADYIA INHYTTYYVSHHVNKTSISYLNDWDVKISYERNGVPIGKQAYSNWLYVVPWGIYKAVMHVKEKYKDPIIIIGENGIDQPGNETLPGALYDFFRIQYFDQY LHELKRAIKDGARVTGYFAWSLLDNFEWRLGFTSKFGIVYVDRSTFTRYPKDSTRWFRKMIKS |
Full Sequence |
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Protein Sequence Length: 493 Download |
MNMPLLLLIA IVVVSLSHGN GEQTDLTRET FPAGFVFGTA SSAYQVEGNA LQYGRGPCIW 60 DTFLMQPGVT PDNSTANVTV DEYHRYMDDV DNMVRVGFDA YRFSISWSRI FPSGLGKINK 120 DGVDYYHRLI DYMLANNIIP YVVLYHYDLP QVLHDQYKGW LHPRIVRDFV RFADFCFKTY 180 GHKVKNWFTI NEPRMMANHG YGDGFFPPGR CTGCQPGGNS ATEPYIAAHN LLLSHAAAVR 240 TYRDKYQAIQ KGKIGILLDF VWYEPLTDKE EDHAAAHRAR EFTLGWYLHP ITYGHYPETM 300 QNAVKERLPN FTREQSEMIK GSADYIAINH YTTYYVSHHV NKTSISYLND WDVKISYERN 360 GVPIGKQAYS NWLYVVPWGI YKAVMHVKEK YKDPIIIIGE NGIDQPGNET LPGALYDFFR 420 IQYFDQYLHE LKRAIKDGAR VTGYFAWSLL DNFEWRLGFT SKFGIVYVDR STFTRYPKDS 480 TRWFRKMIKS EV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 1.0e-113 | 27 | 489 | 473 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-115 | 24 | 491 | 475 | + beta-glucosidase | ||
COG2723 | BglB | 8.0e-116 | 30 | 490 | 469 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-120 | 32 | 484 | 453 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-158 | 27 | 490 | 468 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005618 | cell wall |
GO:0005829 | cytosol |
GO:0005840 | ribosome |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC55716.1 | 0 | 26 | 491 | 23 | 490 | beta-mannosidase 3 [Oncidium Gower Ramsey] |
GenBank | ABC55717.1 | 0 | 4 | 491 | 3 | 500 | beta-mannosidase 2 [Oncidium Gower Ramsey] |
GenBank | EEC69164.1 | 0 | 1 | 492 | 1 | 492 | hypothetical protein OsI_38122 [Oryza sativa Indica Group] |
RefSeq | NP_001066656.1 | 0 | 1 | 492 | 1 | 492 | Os12g0420100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438912.1 | 0 | 21 | 491 | 37 | 479 | hypothetical protein SORBIDRAFT_10g028060 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 26 | 489 | 15 | 480 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 2rgm_A | 0 | 26 | 489 | 15 | 480 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 2rgl_B | 0 | 26 | 489 | 15 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 26 | 489 | 15 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 26 | 489 | 15 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |