| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os12g24040.1 |
| Family | GH9 |
| Protein Properties | Length: 722 Molecular Weight: 76893.2 Isoelectric Point: 8.8384 |
| Chromosome | Chromosome/Scaffold: 12 Start: 13661628 End: 13665792 |
| Description | glycosyl hydrolase 9B5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 343 | 528 | 3e-40 |
| SDVAQDDVLGMYKQTADAVMCILLPDSETAAFTTKGGLLYVAEWNSLQHPVASAFLAAVYSDYMQSSRKTELTCSGQGFSPSDLRKFAKSQADYLLGSNP MKISYLVGYGDRYPERVHHRGISIPENVDTGCDSHKWLETSKPNPNVTTDALVGGLYKNNSFVDERDNVMHNEATTYNCALVAGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 722 Download |
| MSGVHVSLLS LFPLFSPFLI SLFLTSLQAT GEEDSTTGSD WWGEGQRAVA NWDKGKGEGA 60 APAADGDKAI DGEKGRRAGG GGLPMTAPRP RGASPAASAS APLRFARTPP AGRILPSALS 120 AAERSSAAAS STESQTRPTG ARRERRSGRR RAVGALAPAS PLCESISNDI HNCSGNVCMY 180 EASTNAGDTG GKVGTDTFAV GTAKANLAFG CVVASNIDTM DGSSGIVGLG RTPWSLVTQT 240 GVAAFSYCLA PHDAGKNNAL FLGSTAKLAG GGKTASTPFV NISGNDLSNY YKVQLEVLKA 300 GDAMIPLPPS GVLWDNYEVK FCGVLLEFQV LLSRVSFFAS QGSDVAQDDV LGMYKQTADA 360 VMCILLPDSE TAAFTTKGGL LYVAEWNSLQ HPVASAFLAA VYSDYMQSSR KTELTCSGQG 420 FSPSDLRKFA KSQADYLLGS NPMKISYLVG YGDRYPERVH HRGISIPENV DTGCDSHKWL 480 ETSKPNPNVT TDALVGGLYK NNSFVDERDN VMHNEATTYN CALVAGLLSA LVSTTSLQRQ 540 HRTAGGGGGS GGGGGGRRRP TQPRRRHQQP ASSRAPPLLP AGRLVPIGCR HRPFSLPLVP 600 VGQRAALLPA SRRPSRHPPR RQLAEKLLIR RFGVAEMNCE TCQLKELVRS KFHHFLLFFS 660 FSFFSFMELL VWFLCLLFFF CCAALFWVAG TGASGDQGCA TMHFAYHILP QNLEPCSAQR 720 L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02420 | PLN02420 | 2.0e-41 | 314 | 520 | 215 | + endoglucanase | ||
| PLN02340 | PLN02340 | 9.0e-44 | 314 | 521 | 215 | + endoglucanase | ||
| PLN02171 | PLN02171 | 8.0e-45 | 314 | 520 | 213 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-45 | 314 | 519 | 206 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 1.0e-110 | 309 | 520 | 214 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF29687.2 | 0 | 179 | 543 | 1 | 365 | Os12g0428200 [Oryza sativa Japonica Group] |
| GenBank | EAZ20312.1 | 0 | 179 | 539 | 1 | 367 | hypothetical protein OsJ_35923 [Oryza sativa Japonica Group] |
| GenBank | EAZ38281.1 | 0 | 329 | 539 | 281 | 491 | hypothetical protein OsJ_22659 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058583.1 | 0 | 329 | 539 | 305 | 515 | Os06g0715300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066668.1 | 0 | 1 | 647 | 1 | 647 | Os12g0428200 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 1e-17 | 316 | 537 | 252 | 431 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ksc_A | 1e-17 | 316 | 537 | 252 | 431 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ks8_A | 1e-17 | 316 | 537 | 252 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia7_A | 0.000000000006 | 370 | 531 | 288 | 427 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ia6_A | 0.000000000006 | 370 | 531 | 288 | 427 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
