Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os12g38930.1 |
Family | GT8 |
Protein Properties | Length: 555 Molecular Weight: 62401.6 Isoelectric Point: 9.3266 |
Chromosome | Chromosome/Scaffold: 12 Start: 23935881 End: 23941423 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 193 | 523 | 0 |
CLSLRLTDEYSSNALARKQLPPPELIPRLSDNSYLHFVLASDNILAASVVVSSTIRSSLKPGRIVFHVITDKKTYPAMHSWFALNTLSPAIVEVKGVHQF DWLTRENVPVLEAIETQHTVRSRFHGNHLARNSAGDSPRVFAAKLQAGSPTYTSVLNHIRIYLPELFPNLNKVVFLDDDVVVQRDLSSLWDIDLGGKVNG AVETCRGGDTWVMSKRFRNYFNFSHPLIANNFDPSECAWAYGMNIFDLSAWRKTSIKDKYHHWVRENLSSNFTLWRLGTLPPGLIAFRGHVHPIDPSWHL LGLGYQEKTDIPSVQKAAVIHYNGQSKPWLD |
Full Sequence |
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Protein Sequence Length: 555 Download |
MQIRLSPSMR SITISSSGIG IGGGNGGGGG GGGGVGSGLL DLMKLKAAAR HFSYRTVFHT 60 VLILAFLLPF VFILTALVTL EGFNKCSSLD CLGRRLGPRL LGRGNDGSMR VMRDLYRMLD 120 EINSEEVPVD LKVPDSFDEF IWDMKNNDYD LRSFAFRLKA TMESMDRELR TSRLSEQLNK 180 HYAAIAIPKG LHCLSLRLTD EYSSNALARK QLPPPELIPR LSDNSYLHFV LASDNILAAS 240 VVVSSTIRSS LKPGRIVFHV ITDKKTYPAM HSWFALNTLS PAIVEVKGVH QFDWLTRENV 300 PVLEAIETQH TVRSRFHGNH LARNSAGDSP RVFAAKLQAG SPTYTSVLNH IRIYLPELFP 360 NLNKVVFLDD DVVVQRDLSS LWDIDLGGKV NGAVETCRGG DTWVMSKRFR NYFNFSHPLI 420 ANNFDPSECA WAYGMNIFDL SAWRKTSIKD KYHHWVRENL SSNFTLWRLG TLPPGLIAFR 480 GHVHPIDPSW HLLGLGYQEK TDIPSVQKAA VIHYNGQSKP WLDIGFKHLQ PFWTRHVNYS 540 NEFIRNCHIM EPQL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 2.0e-132 | 145 | 549 | 405 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 7.0e-138 | 149 | 549 | 403 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 552 | 553 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 549 | 553 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 0 | 47 | 550 | 508 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0009058 | biosynthetic process |
GO:0016740 | transferase activity |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY83641.1 | 0 | 109 | 554 | 1 | 446 | hypothetical protein OsI_38869 [Oryza sativa Indica Group] |
RefSeq | NP_001067123.1 | 0 | 1 | 554 | 1 | 554 | Os12g0578500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145771.1 | 0 | 1 | 554 | 1 | 535 | hypothetical protein LOC100279278 [Zea mays] |
RefSeq | XP_002284273.1 | 0 | 1 | 551 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002443426.1 | 0 | 1 | 554 | 1 | 535 | hypothetical protein SORBIDRAFT_08g019260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00004 | 339 | 521 | 70 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00004 | 339 | 521 | 70 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00004 | 339 | 521 | 70 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |