| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os12g44240.1 |
| Family | GT14 |
| Protein Properties | Length: 427 Molecular Weight: 47468.4 Isoelectric Point: 7.7523 |
| Chromosome | Chromosome/Scaffold: 12 Start: 27436231 End: 27438509 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 76 | 336 | 0 |
| FAYLISGSAGDAAALRRVLLALYHPRNLYILHLDAEAPDSDRANLAADLADHPVIAAAANVHVIQRANLVTYRGPTMVANTLHAAAAFLYTNQHPHLEWD WFINLSASDYPLLTQDDLIHVFSKLPRGLNFIDHTSNIGWKEYQRAKPVIIDPGLYMKKKADVFWIPQRRSVPTAFKLFTGSAWMALSKPFVEYCIWGWD NLPRTVLMYYANFISSPEGYFHTVVCNAEEFKNTTVNHDLHYISWDNPPKQHPHYLTIEDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 427 Download |
| MKPTTGTAAA AAVDRRWLLP LAIGSALSLL LLVLLTTFPL PFPFPSSAAS RPPNPTLFVE 60 HKLAPSPPST ASPPRFAYLI SGSAGDAAAL RRVLLALYHP RNLYILHLDA EAPDSDRANL 120 AADLADHPVI AAAANVHVIQ RANLVTYRGP TMVANTLHAA AAFLYTNQHP HLEWDWFINL 180 SASDYPLLTQ DDLIHVFSKL PRGLNFIDHT SNIGWKEYQR AKPVIIDPGL YMKKKADVFW 240 IPQRRSVPTA FKLFTGSAWM ALSKPFVEYC IWGWDNLPRT VLMYYANFIS SPEGYFHTVV 300 CNAEEFKNTT VNHDLHYISW DNPPKQHPHY LTIEDLDRMV ASDAPFARKF HADDPVLDKI 360 DAEILLRGPD MLTPGGWCGG TRENGSDPCS VIGNTTHLQP GRGAVRLQRL MTSLLSEEKF 420 HPRQCK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 5.0e-73 | 76 | 340 | 269 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 75 | 426 | 352 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV49991.1 | 0 | 1 | 426 | 1 | 425 | putative N-acetylglucosaminyltransferase [Hordeum vulgare subsp. vulgare] |
| GenBank | ACO87683.1 | 0 | 56 | 426 | 50 | 424 | b-1-3-galactosyl-o-glycosyl-glycoprotein [Brachypodium sylvaticum] |
| EMBL | CAH05144.1 | 0 | 57 | 426 | 50 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
| EMBL | CAH10050.1 | 0 | 57 | 426 | 50 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Triticum aestivum] |
| RefSeq | NP_001067391.1 | 0 | 1 | 426 | 1 | 426 | Os12g0639700 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000005 | 90 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000005 | 90 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000005 | 90 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000005 | 90 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000002 | 90 | 296 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
