| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10000045 |
| Family | CE8 |
| Protein Properties | Length: 217 Molecular Weight: 23740 Isoelectric Point: 4.8401 |
| Chromosome | Chromosome/Scaffold: 8243979 Start: 108 End: 835 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 47 | 206 | 0 |
| SAAGRGDFETIQEAIDSVPSNNSELVFIWVKPGVYVEKVIVPKDKPFITLGGTKPAANDTVVTWHEKGDIFESATLSVLAPYFVARYLTIQNTFGRGGKA VALRVSGDRAAFFDCKMLSYQDTLLDDTGSHYYRNCYIEGATDFICGDASSLFEASDISL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 217 Download |
| MMMIHRLATT IILALLLLQF QTTLASDASP TPPKDWSVAN LIRVDNSAAG RGDFETIQEA 60 IDSVPSNNSE LVFIWVKPGV YVEKVIVPKD KPFITLGGTK PAANDTVVTW HEKGDIFESA 120 TLSVLAPYFV ARYLTIQNTF GRGGKAVALR VSGDRAAFFD CKMLSYQDTL LDDTGSHYYR 180 NCYIEGATDF ICGDASSLFE ASDISLLVTS LFHSRE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01095 | Pectinesterase | 8.0e-45 | 50 | 204 | 160 | + Pectinesterase. | ||
| PLN02671 | PLN02671 | 2.0e-48 | 35 | 204 | 185 | + pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-53 | 50 | 200 | 167 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 8.0e-54 | 39 | 199 | 170 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-95 | 31 | 200 | 170 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 0 | 1 | 207 | 8 | 207 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37658.1 | 0 | 1 | 207 | 26 | 225 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281308.1 | 0 | 33 | 207 | 55 | 225 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305435.1 | 0 | 16 | 210 | 1 | 192 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512914.1 | 0 | 35 | 200 | 37 | 198 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6e-26 | 47 | 204 | 12 | 172 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 7e-20 | 50 | 204 | 11 | 168 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.00000000000003 | 44 | 204 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000003 | 44 | 204 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000003 | 44 | 204 | 8 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Signal Peptide | |||||
|---|---|---|---|---|---|
 | |||||
| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| FC069528 | 168 | 33 | 200 | 0 |
| AJ795739 | 180 | 26 | 204 | 0 |
| AJ793669 | 180 | 26 | 204 | 0 |
| DR952425 | 175 | 33 | 207 | 0 |
| AM721699 | 168 | 33 | 200 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Linum usitatissimum | Lus10040446 | ||||
| Populus trichocarpa | Potri.009G117700.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |