Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10000604 |
Family | GT47 |
Protein Properties | Length: 567 Molecular Weight: 64819.7 Isoelectric Point: 7.1764 |
Chromosome | Chromosome/Scaffold: 645 Start: 29755 End: 31455 |
Description | root hair specific 8 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 177 | 504 | 0 |
SCDGRGVYVYDLPTKFNKDLVGQCGDMIPWVADHYFCNYFENGGLGKPIEKLGKGWYDTHQYSLEPIFHSRILSHPCRVDSQNEAKLFYVPYYGGLDILR WHFKNVSNDVKDTLGLEVIKWLESQKPWKQNNGKDHVFVLGKISWDFRRRPDSGWGTRFLQLEQMQNPTKLLIERQPWDVNDIGIPHPTYFHPHSDDDIL AWQLRVMRSKRKSLISFAGAARPDQPDNIRSILIKQCVDAPEQCKFLNCSGGGCDRPESLVEMFMESEFCLQPPGDSPTRKSVFDSLVSGCIPVLFSPFT AYYQYPWHLPEEHEKYSVFVDEEQVRKM |
Full Sequence |
---|
Protein Sequence Length: 567 Download |
MAISVPRRKN SNKVVSKKTE TSCRDLCFFH TILVRALSRI PLAIFLLILV YTWSSSTTIM 60 SGHHVLHVCV SSRKLNDLYC LSAGTQHPAG AGLDDFPLLP NASISTIHGD LTSHVTTNGT 120 NNNVTTPLNI NAAIRDTSTE EEKDQETEEA NRVIEQHLRL HRSWSSNETS WSSSTSSCDG 180 RGVYVYDLPT KFNKDLVGQC GDMIPWVADH YFCNYFENGG LGKPIEKLGK GWYDTHQYSL 240 EPIFHSRILS HPCRVDSQNE AKLFYVPYYG GLDILRWHFK NVSNDVKDTL GLEVIKWLES 300 QKPWKQNNGK DHVFVLGKIS WDFRRRPDSG WGTRFLQLEQ MQNPTKLLIE RQPWDVNDIG 360 IPHPTYFHPH SDDDILAWQL RVMRSKRKSL ISFAGAARPD QPDNIRSILI KQCVDAPEQC 420 KFLNCSGGGC DRPESLVEMF MESEFCLQPP GDSPTRKSVF DSLVSGCIPV LFSPFTAYYQ 480 YPWHLPEEHE KYSVFVDEEQ VRKMKVNVVG RLMMIPARQR EEMRRFIVYE LLPGLVYGDS 540 NSQLIKFQDS FAITVNNLIE RVHRLE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-69 | 178 | 501 | 339 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34680.1 | 0 | 1 | 566 | 456 | 993 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_176534.2 | 0 | 1 | 564 | 24 | 662 | catalytic [Arabidopsis thaliana] |
RefSeq | XP_002269913.1 | 0 | 1 | 566 | 1 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0 | 1 | 566 | 1 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 1 | 566 | 1 | 567 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |