| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10000757 |
| Family | GH116 |
| Protein Properties | Length: 951 Molecular Weight: 105636 Isoelectric Point: 6.3511 |
| Chromosome | Chromosome/Scaffold: 1775 Start: 26215 End: 32700 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 533 | 895 | 0 |
| GRFLYLEGVEYIMWCTYDVHFYASFALLELFPKIELSIQREFAKAVLCEDGRKVKYLAEGNVGIRKARGAIPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMSFGVDVWPAVRTAMEYMEQFDKDDDGLIENDGFPDQTYDTWTVHGVSAYCGGLWLAALQAAAAMALQLGDKYFAELCKSKFVKA KAAFESKLWNGSYFNYDSGSSGNSKSIQADQLAGQWYTASSGLPPLFDEIKIKSALQKIYDFNVMKVKGGKIGAVNGMHPNGKVDETCMQSREIWTGVTY GLAATMILAGMEDQAFATAEGIFTAGWSEQGYGYWFQTPEGWTVDGHYRSLIYMRPLSIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 951 Download |
| MVTGTLFHRR KHSWPPEEFI NKATLQLFDF DSAAPPEQAW RRKLNSHANL LKEFSVTFAE 60 AIKMVGLGIR LWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIVPGS NEPSPVMANQ FSIFVSRDGG NKSYASVLAP GQHDCIGKPR DHGISSWDWN 180 LNGQHSTYHA LFPRAWTVYD GEPDPDLKIS CRQISPFIPH NYRESSLPTA VFVYTLVNTG 240 KERAKVSLLF TWANSVGGVS HLSGDHMNEP FVTAKGNPPV TFAVGACETQ NVNVSVLPCF 300 GLSEGSYVTA KNMWAQMAKD GQFDRENLNS GPSMPSSAGE TLCAAVSADT WVEPQGKCTI 360 AFALAWSSPK VRFKKGSSYN RRYTKFYGTS ERAAQKLVHD ALTNYKKWEE DIEKWQNPIL 420 KDERLPEWYK FTLFNELYFL VAGGTVWIDA TLPERVANGR CPPIAEEGAV VVKHDAVDGS 480 SVHSGSAEDS DGSSHEEHPS ADEPQVVDDE RITNHSLHPL AVPDPFIDSD DVGRFLYLEG 540 VEYIMWCTYD VHFYASFALL ELFPKIELSI QREFAKAVLC EDGRKVKYLA EGNVGIRKAR 600 GAIPHDLGTH DPWNEMNAYN IHDTSKWKDL NPKFVLQVYR DFAATGDMSF GVDVWPAVRT 660 AMEYMEQFDK DDDGLIENDG FPDQTYDTWT VHGVSAYCGG LWLAALQAAA AMALQLGDKY 720 FAELCKSKFV KAKAAFESKL WNGSYFNYDS GSSGNSKSIQ ADQLAGQWYT ASSGLPPLFD 780 EIKIKSALQK IYDFNVMKVK GGKIGAVNGM HPNGKVDETC MQSREIWTGV TYGLAATMIL 840 AGMEDQAFAT AEGIFTAGWS EQGYGYWFQT PEGWTVDGHY RSLIYMRPLS IWGMQWALSL 900 PKAILDAPKI NIMERLLLSP SARFSQNESG VRRIAAKAKC FGNSVFKCAC * 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.002 | 599 | 764 | 183 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 7.0e-31 | 102 | 449 | 361 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-63 | 102 | 408 | 330 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 3.0e-72 | 530 | 898 | 391 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 6.0e-160 | 533 | 896 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 950 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 950 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 950 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 950 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 950 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 675 | 951 | 0 |
| HO779860 | 149 | 528 | 676 | 0 |
| GT045992 | 336 | 600 | 935 | 0 |
| GT051521 | 333 | 585 | 917 | 0 |
| HO779860 | 50 | 403 | 452 | 9e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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