Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10001028 |
Family | GT47 |
Protein Properties | Length: 516 Molecular Weight: 59109.8 Isoelectric Point: 8.2874 |
Chromosome | Chromosome/Scaffold: 797 Start: 1958 End: 3505 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 83 | 422 | 0 |
CSGRYIYVHDLPARFNTEVLKSCRHSLIKWLDMCPYLSNMGLGTRVNDHGNVLMEKSWYATYQFVLEVIFHHRMESYECLTNDSTLASAIFVPFYAGFDV GRYLWGYNATTRDALGVELVKWLRNQPEWKGGKGGLWGRDHFFVSGRIAWDLQRHDRDGSDWGSKLMQLPESMNMTMLTVETTSWSNEFAVPYPSYFHPK TAGEVHQWQRRVRGHKREYLFAFVGAPRENMAGSIHGELMKQCLASSTKKCKLLNCAPVGKCDSPVTVMEVFQNAVFCLQPAGDSPTRRSTFDSILAGCI PVFFHPYSAYGQYTWHLPRNYSLYSVYIPEELVREGKVNV |
Full Sequence |
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Protein Sequence Length: 516 Download |
MKLRSSQIHC SSGQLLMKDM DKFHTKKPTK RYYTTIPHLL FFILIAPFLL FICYYTIHHT 60 SVETKGNRLA FLFTTLFHRD DACSGRYIYV HDLPARFNTE VLKSCRHSLI KWLDMCPYLS 120 NMGLGTRVND HGNVLMEKSW YATYQFVLEV IFHHRMESYE CLTNDSTLAS AIFVPFYAGF 180 DVGRYLWGYN ATTRDALGVE LVKWLRNQPE WKGGKGGLWG RDHFFVSGRI AWDLQRHDRD 240 GSDWGSKLMQ LPESMNMTML TVETTSWSNE FAVPYPSYFH PKTAGEVHQW QRRVRGHKRE 300 YLFAFVGAPR ENMAGSIHGE LMKQCLASST KKCKLLNCAP VGKCDSPVTV MEVFQNAVFC 360 LQPAGDSPTR RSTFDSILAG CIPVFFHPYS AYGQYTWHLP RNYSLYSVYI PEELVREGKV 420 NVEERLVRVP EADVAAMREA VIELIPKVTY ADPRSESMGF EDAFGIAVKG VLERIGKVRR 480 QVEEGNDPGT GFARPDGWKL KLEGVGSDHE WDKFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-69 | 82 | 429 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002280815.1 | 0 | 81 | 515 | 91 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321098.1 | 0 | 81 | 514 | 48 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 81 | 515 | 74 | 498 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002518609.1 | 0 | 81 | 515 | 74 | 501 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 81 | 504 | 100 | 523 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |