y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10001076 |
Family | GT14 |
Protein Properties | Length: 443 Molecular Weight: 50273.3 Isoelectric Point: 9.1294 |
Chromosome | Chromosome/Scaffold: 791 Start: 47892 End: 49795 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 93 | 349 | 0 |
LAYLISGSAGDGVNLKRALKALYHPRNQYVVHLDLEAPLEERLELIRWVKEGEKVFQQVGNVRVVVRSNLVTYRGPTMFSNTLHAASILLRDGGEWDWFI NLSASDYPLLTQDDLLYTLSSIPRDLNFIEHTSDIGWKEDQRARPVIIDPGLYSLQKSDVFWVTERRSVPSAYRLFTGSAWMMLSRPFIEYCLWGWDNLP RIVLMYYTNFLSSPEGYFHTVICNADEFRNTTVNHDLHFISWDNPPKQHPHFLTLDD |
Full Sequence |
---|
Protein Sequence Length: 443 Download |
METINGSKLQ QQKKQQKWFF LLISSLFLST LLILLTLTFS PTTSTSTKLL FHSYRRTWWQ 60 KSGAGAGADR KLPLFAESKL SKPEASAAKV PRLAYLISGS AGDGVNLKRA LKALYHPRNQ 120 YVVHLDLEAP LEERLELIRW VKEGEKVFQQ VGNVRVVVRS NLVTYRGPTM FSNTLHAASI 180 LLRDGGEWDW FINLSASDYP LLTQDDLLYT LSSIPRDLNF IEHTSDIGWK EDQRARPVII 240 DPGLYSLQKS DVFWVTERRS VPSAYRLFTG SAWMMLSRPF IEYCLWGWDN LPRIVLMYYT 300 NFLSSPEGYF HTVICNADEF RNTTVNHDLH FISWDNPPKQ HPHFLTLDDY QSMVDSNAPF 360 ARKFGRNDPV LDKVDSEILG RSADGFVPGG WWSINEGNPN ASIPENIRAN TTKLKPGPGA 420 QRLKNLITGL LSADGFRTSH CI* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 6.0e-71 | 93 | 354 | 266 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 72 | 441 | 373 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28190.1 | 0 | 73 | 441 | 127 | 471 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ01579.1 | 0 | 73 | 442 | 68 | 444 | hypothetical protein OsI_23613 [Oryza sativa Indica Group] |
RefSeq | NP_001130420.1 | 0 | 22 | 442 | 41 | 439 | hypothetical protein LOC100191516 [Zea mays] |
RefSeq | XP_002285159.1 | 0 | 73 | 441 | 61 | 428 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313551.1 | 0 | 70 | 441 | 55 | 428 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000003 | 107 | 285 | 99 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000003 | 107 | 285 | 99 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000003 | 107 | 285 | 99 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000003 | 107 | 285 | 99 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000006 | 107 | 285 | 99 | 263 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |