| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10001087 |
| Family | GH14 |
| Protein Properties | Length: 556 Molecular Weight: 61924.9 Isoelectric Point: 8.2498 |
| Chromosome | Chromosome/Scaffold: 210 Start: 43004 End: 45573 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 97 | 507 | 0 |
| FVMLPLDTVTHGGNLNKPRAMNASLLALKRAGVEGVMVDAWWGLVEKDGPLRYNWEGYAELVEMVKHHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDRSGRRNPEYISLGCDSLAVLRGRTPIQVYSDYMRSFRDRFADYLGDVIVEIQVGMGPCGELRYPAYPESNGTWNFPGIGEFQCYDKYMR ASLKASAEEQKKKEWGQGGPHDSGQYNQYPEDTGFFKREGTWKTEYGHFFLQWYSSKLLQHGNTILSSAKSIFKGTGAKLSGKVAGIHWHYRTRSHAAEL TAGYYNTRHHDGYLPLAKMFSKHGAVLNFTCMEMRDGEQPENGSCSPEGLVKQVKMATKAAGTELAGENALERYDLAAYRQVVSTSGGGLAAFTYLRLNK RLFEEGNWRNL | |||
| Full Sequence |
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| Protein Sequence Length: 556 Download |
| MALTLRSSTS FINLNDYSSL NNNNNNNTNI IRSSISFKPT SLCSIQAMSS SHVLLEQQPH 60 KSVERLHDQT LSGSHHHDIS SSSSSNGLLS SSKVPVFVML PLDTVTHGGN LNKPRAMNAS 120 LLALKRAGVE GVMVDAWWGL VEKDGPLRYN WEGYAELVEM VKHHGLKLQV VMSFHQCGGN 180 VGDSCSIPLP PWVLEEISKN PDLVYTDRSG RRNPEYISLG CDSLAVLRGR TPIQVYSDYM 240 RSFRDRFADY LGDVIVEIQV GMGPCGELRY PAYPESNGTW NFPGIGEFQC YDKYMRASLK 300 ASAEEQKKKE WGQGGPHDSG QYNQYPEDTG FFKREGTWKT EYGHFFLQWY SSKLLQHGNT 360 ILSSAKSIFK GTGAKLSGKV AGIHWHYRTR SHAAELTAGY YNTRHHDGYL PLAKMFSKHG 420 AVLNFTCMEM RDGEQPENGS CSPEGLVKQV KMATKAAGTE LAGENALERY DLAAYRQVVS 480 TSGGGLAAFT YLRLNKRLFE EGNWRNLVEF VKNMSESGRN CNKELPECDT GRSDLYVGFV 540 KGKSVRKDSK EILLV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-144 | 94 | 514 | 432 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 2.0e-171 | 97 | 510 | 426 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02803 | PLN02803 | 0 | 1 | 555 | 565 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 94 | 523 | 440 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 0 | 94 | 514 | 433 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 555 | 1 | 543 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 555 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 553 | 1 | 546 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 553 | 1 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 555 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 81 | 521 | 1 | 448 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 1q6c_A | 0 | 81 | 521 | 1 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 81 | 521 | 1 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1uko_D | 0 | 81 | 521 | 1 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 81 | 521 | 1 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 455 | 94 | 547 | 0 |
| HO794833 | 414 | 132 | 541 | 0 |
| HO781538 | 349 | 93 | 441 | 0 |
| HO825836 | 388 | 168 | 551 | 0 |
| HO593646 | 412 | 114 | 516 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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