| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10001151 |
| Family | GH3 |
| Protein Properties | Length: 635 Molecular Weight: 69153.2 Isoelectric Point: 9.7696 |
| Chromosome | Chromosome/Scaffold: 2532 Start: 9726 End: 14416 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 109 | 345 | 0 |
| LSTRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGVTRDPVLIKRIGEATAKEVRATGISYVFAPCIAVCRDPRWGRCFESYSEDPSIVQMMTEIIPGLQ GDIPSHSRKGVPFVATGGSKVAACAKHYLGDGGTTKGINENNTVISWKGLRSIHMPAYLNSVSKGVATIMVSYTSWNGKKMHANRDLITGFLKNKLNFRG FVISDWQGIDRITSPPHTNFTSSITTGITAGLDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 635 Download |
| MGRRDWIPAM CIVLLLVQIS LQQCESKQYI KYKDAKQPVG ARIKDLLKRM SVKEKIGQMV 60 QIDLLVASPA VLKKYMIGSV LSGGGSVPSA KASVEEWVNT VNGLQKGALS TRLGIPMIYG 120 IDAVHGHNNV YNATIFPHNV GLGVTRDPVL IKRIGEATAK EVRATGISYV FAPCIAVCRD 180 PRWGRCFESY SEDPSIVQMM TEIIPGLQGD IPSHSRKGVP FVATGGSKVA ACAKHYLGDG 240 GTTKGINENN TVISWKGLRS IHMPAYLNSV SKGVATIMVS YTSWNGKKMH ANRDLITGFL 300 KNKLNFRGFV ISDWQGIDRI TSPPHTNFTS SITTGITAGL DMVMVPYNYT EFIDDLTYQV 360 KNNIIPMSRI NDAVQRILRV KFVMGMFEKP LADLTMANEL GKQEHRELAR EAVRKSLVLL 420 KNDGDHKKPL LPLTKKAPKI LVAGTHAHNL GNQCGGWTIT WQGVPGNNLT SGTTILKAVK 480 SAVDPSTQVV YKEKPNANFI KSNNFSYAIV VVGEPPYAET FGDSLNLTIP GDGLTTINNV 540 CGAVKCVVVL ITGRPVVIQP HYLSKIDALV AAWLPGSEGQ GVTDLLFGDF GFTGKLARTW 600 FKSVDQLPMN VGDSHYDPLF PFGFGLTTHP LITS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN03080 | PLN03080 | 1.0e-34 | 112 | 627 | 589 | + Probable beta-xylosidase; Provisional |
| pfam01915 | Glyco_hydro_3_C | 3.0e-42 | 417 | 627 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| PRK15098 | PRK15098 | 4.0e-67 | 35 | 627 | 672 | + beta-D-glucoside glucohydrolase; Provisional |
| COG1472 | BglX | 4.0e-79 | 50 | 485 | 443 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| pfam00933 | Glyco_hydro_3 | 2.0e-87 | 54 | 380 | 331 | + Glycosyl hydrolase family 3 N terminal domain. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 29 | 630 | 25 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| GenBank | ABK95015.1 | 0 | 7 | 633 | 4 | 625 | unknown [Populus trichocarpa] |
| RefSeq | XP_002266470.1 | 0 | 28 | 630 | 24 | 624 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313632.1 | 0 | 1 | 630 | 1 | 624 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523935.1 | 0 | 28 | 631 | 28 | 630 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 28 | 629 | 1 | 600 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1x38_A | 0 | 28 | 629 | 1 | 600 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1lq2_A | 0 | 28 | 629 | 1 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 28 | 629 | 1 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 28 | 629 | 1 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
