| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10001174 |
| Family | GT16 |
| Protein Properties | Length: 380 Molecular Weight: 43232.6 Isoelectric Point: 8.7338 |
| Chromosome | Chromosome/Scaffold: 560 Start: 42438 End: 43577 |
| Description | beta-1,2-N-acetylglucosaminyltransferase II |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT16 | 27 | 365 | 0 |
| LLEKLNQLPPRNVDLYPKLVQDHVAIVLYVHNRPQYLKVVVDSLSKVVGINETLLIVSHDGYFKEMNKIVASIKFCRVKQIFAPYSPHVFDSSFPGVSSN DCREKENAAKKDCVGNPDQYGNHRSPKIVSLKHHWWWMMNTVWDGLQETKRHHGHILFIEEDHFIFPNAYRNLKVLTDLKPVKCPDCFAANLAPSDVNSR GENLDSLLAERMGNVGYSFNRTVWEMIHLKAREFCFFDDYNWDITMWATVYPSFGRPVYSLRGPRTSAVHFGKCGLHQGNGEKTACIDSGAVNIGVSEAD MAVNINKEWEVRVYENQPGYKAGFKGWGGWGDDRDRELC | |||
| Full Sequence |
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| Protein Sequence Length: 380 Download |
| MAIYGKTSRL KVGAFLKLPK QSKLSILLEK LNQLPPRNVD LYPKLVQDHV AIVLYVHNRP 60 QYLKVVVDSL SKVVGINETL LIVSHDGYFK EMNKIVASIK FCRVKQIFAP YSPHVFDSSF 120 PGVSSNDCRE KENAAKKDCV GNPDQYGNHR SPKIVSLKHH WWWMMNTVWD GLQETKRHHG 180 HILFIEEDHF IFPNAYRNLK VLTDLKPVKC PDCFAANLAP SDVNSRGENL DSLLAERMGN 240 VGYSFNRTVW EMIHLKAREF CFFDDYNWDI TMWATVYPSF GRPVYSLRGP RTSAVHFGKC 300 GLHQGNGEKT ACIDSGAVNI GVSEADMAVN INKEWEVRVY ENQPGYKAGF KGWGGWGDDR 360 DRELCMKFAE MHRIGSTSI* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05060 | MGAT2 | 3.0e-156 | 25 | 365 | 364 | + N-acetylglucosaminyltransferase II (MGAT2). UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II (EC 2.4.1.143) (GnT II/MGAT2) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides. Mutations in the MGAT2 gene lead to congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005795 | Golgi stack |
| GO:0008455 | alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity |
| GO:0009312 | oligosaccharide biosynthetic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD29068.1 | 0 | 13 | 378 | 51 | 416 | putative N-acetylglucosaminyltransferase [Arabidopsis thaliana] |
| EMBL | CAI72505.1 | 0 | 18 | 377 | 72 | 431 | beta 1,2 N-acetylglucosaminyltransferase [Populus alba x Populus tremula] |
| RefSeq | NP_178601.2 | 0 | 13 | 378 | 62 | 427 | beta-1,2-N-acetylglucosaminyltransferase II [Arabidopsis thaliana] |
| RefSeq | XP_002321199.1 | 0 | 18 | 377 | 72 | 431 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530215.1 | 0 | 13 | 373 | 66 | 426 | beta-1,2-n-acetylglucosaminyltransferase II, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FE703894 | 294 | 10 | 303 | 0 |
| JG215780 | 228 | 76 | 303 | 0 |
| JG217659 | 227 | 76 | 302 | 0 |
| FQ424525 | 266 | 75 | 340 | 0 |
| FQ429427 | 257 | 75 | 331 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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