Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10001578 |
Family | GT47 |
Protein Properties | Length: 594 Molecular Weight: 68504.8 Isoelectric Point: 7.941 |
Chromosome | Chromosome/Scaffold: 3460 Start: 88728 End: 90509 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 144 | 487 | 0 |
CSGKYIYVHEIPSSFNSDVLLHCRTLSKWMNMCPYLSNLGLGQQIPNSDAKVVSNSGWYETNQFALEVIFHNRMKQYKCLTSDSTKAAAIFVPYYAGLEV ARYLWSSNRLMRDHYSTELIKWIRGKPEWGRMFGRDHFMVAGRISWDFRRLTEKDDDWGNKLMVLPESKNMTMLTIESSPWNGNDFAIPYPTDFHPSSDN QVTEWQRRMRRMKRRILFSFAGAPRPDLKNSIRNEIIEQCKSANKKCQLLGCQPGSKKCDDPSNLLRMFQGSVFCLQPAGDSYTRRSTFDSILAGCIPVF FHPGSAYVQYLWHFPKDYTKYSVFIPGDEVKEGNANIERILSRI |
Full Sequence |
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Protein Sequence Length: 594 Download |
MEMLVGTRIR FWYFILVIFV VWIFLLAAYF SSTAVNGGGG GSQFSPKSIS TDRKIAGEIH 60 ETGDKKTEDR QSSDEELYPI NSTVENFFIG GEWDKYLQQE EQNQQNNPVK PIIHHHRPNN 120 RPNTIRPKPA ATVVPLPENS ADECSGKYIY VHEIPSSFNS DVLLHCRTLS KWMNMCPYLS 180 NLGLGQQIPN SDAKVVSNSG WYETNQFALE VIFHNRMKQY KCLTSDSTKA AAIFVPYYAG 240 LEVARYLWSS NRLMRDHYST ELIKWIRGKP EWGRMFGRDH FMVAGRISWD FRRLTEKDDD 300 WGNKLMVLPE SKNMTMLTIE SSPWNGNDFA IPYPTDFHPS SDNQVTEWQR RMRRMKRRIL 360 FSFAGAPRPD LKNSIRNEII EQCKSANKKC QLLGCQPGSK KCDDPSNLLR MFQGSVFCLQ 420 PAGDSYTRRS TFDSILAGCI PVFFHPGSAY VQYLWHFPKD YTKYSVFIPG DEVKEGNANI 480 ERILSRISKQ RVAAMREQVI KLIPGIVYAD PRSNLENFED AFDITVDGVL ERIEEMRKNL 540 KEGKILEASE EEEEMNWKKS VFGNVGKPHP WDHFFIREKE WNHQGEGVNF RAN* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-64 | 144 | 487 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64889.1 | 0 | 141 | 559 | 297 | 712 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180468.1 | 0 | 97 | 577 | 238 | 719 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 141 | 575 | 90 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 138 | 592 | 118 | 572 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002313430.1 | 0 | 142 | 579 | 138 | 571 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |