Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10001660 |
Family | GH17 |
Protein Properties | Length: 361 Molecular Weight: 39043.6 Isoelectric Point: 6.3526 |
Chromosome | Chromosome/Scaffold: 2739 Start: 4332 End: 5509 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 25 | 341 | 0 |
GINYGQIANNLPSPQDAVPLIKALGATKVKLYDASPQILKAFSHSNIEFIIGLGNEYLSKMAADQNAAVSWVKSNVQTYLPATNITCIAVGNEVLTLSDE SFIPFLVPALQSIQSAVVSLNLQNQVTVTTPHSLAVLQNSYPPSSGTFRRDLIGCISKILDFNAKTNSPFLINAYPYFAYKANPKQVSLDFVLFQPNQGI IDPVSNLHYDNMLFAQIDAVHYALASLGYKDMPVHISETGWPSKGDADEAGATPENAKKYNGNLIKTICQRKGTPARPNMDLNIYVFALFNENMKTGPTS ERNYGLFKPDGTPAYSI |
Full Sequence |
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Protein Sequence Length: 361 Download |
MEFCTNQFLP LVILLALSAS VDAMGINYGQ IANNLPSPQD AVPLIKALGA TKVKLYDASP 60 QILKAFSHSN IEFIIGLGNE YLSKMAADQN AAVSWVKSNV QTYLPATNIT CIAVGNEVLT 120 LSDESFIPFL VPALQSIQSA VVSLNLQNQV TVTTPHSLAV LQNSYPPSSG TFRRDLIGCI 180 SKILDFNAKT NSPFLINAYP YFAYKANPKQ VSLDFVLFQP NQGIIDPVSN LHYDNMLFAQ 240 IDAVHYALAS LGYKDMPVHI SETGWPSKGD ADEAGATPEN AKKYNGNLIK TICQRKGTPA 300 RPNMDLNIYV FALFNENMKT GPTSERNYGL FKPDGTPAYS IGIDLPAGNS NRSSPAALNI 360 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 101 | 334 | 242 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-99 | 25 | 341 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PIR | 0 | 21 | 343 | 29 | 350 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
RefSeq | XP_002278950.1 | 0 | 30 | 356 | 33 | 358 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 15 | 343 | 6 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317055.1 | 0 | 21 | 343 | 2 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 21 | 343 | 23 | 344 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 341 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 24 | 341 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 24 | 341 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 24 | 345 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 24 | 345 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |