y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10002254 |
Family | CE10 |
Protein Properties | Length: 350 Molecular Weight: 39180.5 Isoelectric Point: 6.852 |
Chromosome | Chromosome/Scaffold: 1478 Start: 19278 End: 21000 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 40 | 346 | 0 |
GTFNRHLAEFLDRKVAANANPVDGVFSFDVIVDRATNLLCRIYRPSNGEEQLNVAELEKPVKSADNDDVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVG LCNAVVVSVNYRRAPEHRYPSAYDDGWTALNWVKSRTWLESSKSSKVHIFLAGDSSGGNIAHHVALRAAESEIEIQGNMLLNPMFGGEVRTESEMRLDGK YFVSVQDRDWYWRAFLPDGADRDHPACNPFGPKATSLEGTKLFPKSFVVIAGLDLVQDWQLAYVEGLKKAGKDVKFLYLEKATIGFYLLPNNAHFHTVMD EIQQFVR |
Full Sequence |
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Protein Sequence Length: 350 Download |
MVKSNEVTTV NESKMVVPLN TWVLISNFKL AYNLLRRPDG TFNRHLAEFL DRKVAANANP 60 VDGVFSFDVI VDRATNLLCR IYRPSNGEEQ LNVAELEKPV KSADNDDVVP VIVFFHGGSF 120 AHSSANSAIY DTLCRRLVGL CNAVVVSVNY RRAPEHRYPS AYDDGWTALN WVKSRTWLES 180 SKSSKVHIFL AGDSSGGNIA HHVALRAAES EIEIQGNMLL NPMFGGEVRT ESEMRLDGKY 240 FVSVQDRDWY WRAFLPDGAD RDHPACNPFG PKATSLEGTK LFPKSFVVIA GLDLVQDWQL 300 AYVEGLKKAG KDVKFLYLEK ATIGFYLLPN NAHFHTVMDE IQQFVRSNC* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.0001 | 91 | 151 | 64 | + Carboxylesterase family. | ||
COG2272 | PnbA | 3.0e-6 | 91 | 151 | 61 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 3.0e-12 | 77 | 302 | 232 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 1.0e-33 | 15 | 348 | 337 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-72 | 112 | 327 | 217 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN86359.1 | 0 | 1 | 349 | 1 | 344 | GID1-4 [Gossypium hirsutum] |
GenBank | ACN86360.1 | 0 | 1 | 349 | 1 | 344 | GID1-5 [Gossypium hirsutum] |
RefSeq | XP_002319576.1 | 0 | 1 | 349 | 1 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328407.1 | 0 | 1 | 349 | 1 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512310.1 | 0 | 1 | 349 | 1 | 344 | Gibberellin receptor GID1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 347 | 8 | 350 | A Chain A, Crystal Structure Of Transcription Regulator Like Protein From Staphylococcus Haemolyticus |
PDB | 2zsh_A | 0 | 1 | 347 | 8 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 4 | 348 | 3 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 4 | 348 | 3 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 4 | 348 | 3 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795605 | 348 | 4 | 350 | 0 |
JG214329 | 265 | 40 | 304 | 0 |
ES790010 | 349 | 1 | 348 | 0 |
HO779605 | 351 | 1 | 350 | 0 |
JG214329 | 47 | 304 | 350 | 5e-21 |
Sequence Alignments (This image is cropped. Click for full image.) |
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