Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10002295 |
Family | CBM43 |
Protein Properties | Length: 509 Molecular Weight: 54271.7 Isoelectric Point: 4.6098 |
Chromosome | Chromosome/Scaffold: 2280 Start: 91146 End: 93903 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 453 | 1.8e-29 |
CTVRDGADPKMLQAALDWACGPGKVNCSALLQGEACYEPDNVIAHATYAFDAYYTQMGKSPDSCDFKGVATISTTNPSHGTC | |||
GH17 | 34 | 354 | 0 |
IGVNIGTDLSDMPHPTQVVALLKAQQIKNIRLYDADRGMLVALANSGIKVMVSVPNDQLLGIGQSNATAANWVSKNVVAHYPATNITAICVGSEVLSTLP NAAPVLVDALKYIHSALVASNLDRQIKVSTPLPSSLILDSFPPSQAFFNRSLNSVMIPMLSFLQSTGSYLMLNIYPYYDYMQSNGVIPLDYALLKPLPPN KEAVDANTLVHYSNVFDAMVDAAYFAMSFLNFTNIPVVVTESGWPSKGDPNEPDATLDNANTYNSNLIRHVYNKTGTPKHPGIAVSTFIYELYNEDVKAG SVSEKNWGLFNANGEPVYNLR |
Full Sequence |
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Protein Sequence Length: 509 Download |
MAVSDSSQLF LVLALFLFVA AAAAATPDDE EPFIGVNIGT DLSDMPHPTQ VVALLKAQQI 60 KNIRLYDADR GMLVALANSG IKVMVSVPND QLLGIGQSNA TAANWVSKNV VAHYPATNIT 120 AICVGSEVLS TLPNAAPVLV DALKYIHSAL VASNLDRQIK VSTPLPSSLI LDSFPPSQAF 180 FNRSLNSVMI PMLSFLQSTG SYLMLNIYPY YDYMQSNGVI PLDYALLKPL PPNKEAVDAN 240 TLVHYSNVFD AMVDAAYFAM SFLNFTNIPV VVTESGWPSK GDPNEPDATL DNANTYNSNL 300 IRHVYNKTGT PKHPGIAVST FIYELYNEDV KAGSVSEKNW GLFNANGEPV YNLRLTGSGS 360 LLANDTANET YCTVRDGADP KMLQAALDWA CGPGKVNCSA LLQGEACYEP DNVIAHATYA 420 FDAYYTQMGK SPDSCDFKGV ATISTTNPSH GTCIYPGSSG KINGTMVNVT APSMNSTASE 480 APAAVDHSVV HLAMLVGSFV MMSLLASL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-8 | 266 | 346 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-17 | 370 | 442 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-36 | 370 | 455 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-90 | 34 | 353 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 29 | 483 | 17 | 470 | beta-1,3-glucanase [Camellia sinensis] |
GenBank | ABN08070.1 | 0 | 16 | 472 | 5 | 460 | Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] |
RefSeq | XP_002301689.1 | 0 | 30 | 505 | 5 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305879.1 | 0 | 31 | 502 | 14 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 30 | 502 | 30 | 504 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 353 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 34 | 355 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 34 | 355 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 34 | 355 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 34 | 355 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |