Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10002466 |
Family | CBM43 |
Protein Properties | Length: 202 Molecular Weight: 21807.8 Isoelectric Point: 6.4881 |
Chromosome | Chromosome/Scaffold: 64 Start: 82678 End: 83493 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 112 | 196 | 3.4e-32 |
WCVAKPTVPEETLQEALDYACGEGGADCDEIKPSGSCFHPDTVFAHASYAYNSYWQKYKRTGGGATCSFGGTAMIINSDPSFLHC |
Full Sequence |
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Protein Sequence Length: 202 Download |
MAPLLLNLFL LLICFVGFTV AGEENIQIQT NNHRKLSQMI NPYPARPTPL PQTSQPPIHS 60 SIGYSIPSNL SPSHSPPPLA PTPSYTYYGN TLPPCNPSIA PAPEVFVAQK LWCVAKPTVP 120 EETLQEALDY ACGEGGADCD EIKPSGSCFH PDTVFAHASY AYNSYWQKYK RTGGGATCSF 180 GGTAMIINSD PSFLHCRFLL S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-22 | 111 | 185 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-37 | 111 | 198 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU22745.1 | 0 | 34 | 201 | 27 | 206 | unknown [Glycine max] |
EMBL | CBI33700.1 | 0 | 47 | 201 | 182 | 357 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 16 | 201 | 191 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 25 | 201 | 207 | 413 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 15 | 197 | 195 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-17 | 108 | 198 | 9 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |