| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10002633 |
| Family | CBM43 |
| Protein Properties | Length: 483 Molecular Weight: 52896.1 Isoelectric Point: 4.8447 |
| Chromosome | Chromosome/Scaffold: 2083 Start: 94475 End: 96822 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 369 | 450 | 1.2e-24 |
| WCVFNPNAKDLSKLADNINYACTFSDCTALGYGSSCNGLDANGNASYAFNMYYQVQNQDDLACNFEGLASVTTQNISQNNCN | |||
| GH17 | 26 | 346 | 0 |
| LGVNWGTMASHKLDPKAVVKLLEDNGIQKVKLFDADANTMNALAGSSLEVMVAIPNDQLQSMTRYGNAQEWVKRNISRYVFNGGAKIKYVAVGNEPFLKT YNGTFESVTFPALQNIQNALNEANFGNIKATVPLNADVYFSPDDQPYPSAGRFRPDINDLMTAIVQFMARNKAPFTVNIYPFLSLYGNDDFPFNYAFFDG VTQPVVDRGSGVQYTNVFDANFDTLVSALKAAGFGDMPIIVGEVGWPTDGDKNANIGNAYRFYNGLMPRLAANKGTPLRPGFIEVYLFGLLDEDAKSIAP GSFERHWGIFRYDGQPKFALD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 483 Download |
| MGRISIWAMV LLWSCCLLFL SSVDGLGVNW GTMASHKLDP KAVVKLLEDN GIQKVKLFDA 60 DANTMNALAG SSLEVMVAIP NDQLQSMTRY GNAQEWVKRN ISRYVFNGGA KIKYVAVGNE 120 PFLKTYNGTF ESVTFPALQN IQNALNEANF GNIKATVPLN ADVYFSPDDQ PYPSAGRFRP 180 DINDLMTAIV QFMARNKAPF TVNIYPFLSL YGNDDFPFNY AFFDGVTQPV VDRGSGVQYT 240 NVFDANFDTL VSALKAAGFG DMPIIVGEVG WPTDGDKNAN IGNAYRFYNG LMPRLAANKG 300 TPLRPGFIEV YLFGLLDEDA KSIAPGSFER HWGIFRYDGQ PKFALDLSGQ GQNRFLVGAK 360 GVDYLPAKWC VFNPNAKDLS KLADNINYAC TFSDCTALGY GSSCNGLDAN GNASYAFNMY 420 YQVQNQDDLA CNFEGLASVT TQNISQNNCN FIIQIENASV PSTRIRLVLL VVSLMVSSLA 480 LV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-5 | 254 | 338 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-18 | 368 | 438 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-31 | 368 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-70 | 26 | 346 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN09816.1 | 0 | 1 | 463 | 1 | 458 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
| RefSeq | XP_002277003.1 | 0 | 3 | 456 | 4 | 454 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319699.1 | 0 | 21 | 455 | 18 | 453 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325410.1 | 0 | 23 | 455 | 20 | 481 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525445.1 | 0 | 21 | 466 | 18 | 462 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 26 | 348 | 3 | 315 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3ur8_A | 0 | 26 | 348 | 3 | 315 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3ur7_B | 0 | 26 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 26 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 26 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
