| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10002950 |
| Family | GH116 |
| Protein Properties | Length: 965 Molecular Weight: 108446 Isoelectric Point: 6.1281 |
| Chromosome | Chromosome/Scaffold: 1060 Start: 112415 End: 116430 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 526 | 884 | 0 |
| GNFLYLEGSEYLMFNTYDVHFYSSFAILMLFPKLELNFQRDFAAAVMMHDPTKMQIMSDGRVVPKKMLGAVPHDMGLNDPWFEMNAYNLFSTARWKDLNP KFVLQIYRDVVATGDMGFARAVWPSVYMAMAYMEQFDKDEDGMIENEGFPDQTYDAWPVHGVSSYCGGLWVAALQATSALARVIGEEDSAKYFWMRYQEA KGVYEKLWNGSYFNYDSSGNPSIHADQLSGQWYARATGLSPIVDEEKVKSALEKIYNYNVMKYKRGTRGAVNGMLPDGRVDTSGMQSKEIWPGVTYALAA SMIQEQMVDIGFNTASGVYQAAWSESGLGYSFQVPEGWNTDEKYRSLCYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 965 Download |
| MVIENGFIKE RDNKAAATKM VDPGKPPALT WQRKLKDEPV PPLPFSLAFK DIAHMLPIGV 60 RLIRHTKAEA AEGRETIFDF LRTHHVTGDH GLPLGSIGTG SIGRSYKGEF QHFKLLPLVH 120 EEKPVLANQF SAFVSRPNGK KSSSVLCSRK PEFPAKPGSG IESWDWNLAG DKSTYHALFP 180 RAWTSYDGEP DPDLRIVSRQ MSPFIPHNYK ESSFPVTVFT FTLYNTGKTS ADVTLLFTWV 240 NSLGGQSGFT GQHYNTKMKT KDGVHGVILN HKTAKGHPQL TFAMAAQETD DVRVSECPYF 300 LVSGPSKSSG ITGKDMWDEI KTHGTFDNLC CKNLPSVPGS SIGAAIAASV TVPSGSVKTV 360 TFSLAWDNPE VRFSGKSYYR RYTKFYGSLG DAAAKLARDA ILEHADWEAQ IEAWQNPILE 420 DKRLPEWYPV TLLNELYYLN AGGTIWTDGS LPLQSLTSIR DRKFSLDGSI LEMKHQNNYH 480 ATKNDTAVEI LERMVSTYEQ MNDRTTSSSN PAFGTYLMNK GEENVGNFLY LEGSEYLMFN 540 TYDVHFYSSF AILMLFPKLE LNFQRDFAAA VMMHDPTKMQ IMSDGRVVPK KMLGAVPHDM 600 GLNDPWFEMN AYNLFSTARW KDLNPKFVLQ IYRDVVATGD MGFARAVWPS VYMAMAYMEQ 660 FDKDEDGMIE NEGFPDQTYD AWPVHGVSSY CGGLWVAALQ ATSALARVIG EEDSAKYFWM 720 RYQEAKGVYE KLWNGSYFNY DSSGNPSIHA DQLSGQWYAR ATGLSPIVDE EKVKSALEKI 780 YNYNVMKYKR GTRGAVNGML PDGRVDTSGM QSKEIWPGVT YALAASMIQE QMVDIGFNTA 840 SGVYQAAWSE SGLGYSFQVP EGWNTDEKYR SLCYMRPLAI WGMQWALTRE KVINEGGVVV 900 LDQPSRKEEE EEEEEEGNYE DLSWYMRQHT GFKKVAKLLQ VPKDDSKVSF LQAAFEFTCS 960 KLPF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.004 | 594 | 741 | 163 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 4.0e-25 | 89 | 448 | 369 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 6.0e-58 | 91 | 407 | 328 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-73 | 525 | 887 | 383 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-166 | 526 | 885 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 3 | 962 | 1 | 947 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 2 | 962 | 1 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275782.1 | 0 | 3 | 962 | 17 | 963 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325943.1 | 0 | 55 | 964 | 1 | 891 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525532.1 | 0 | 8 | 964 | 6 | 948 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GW866491 | 289 | 540 | 828 | 0 |
| GW866809 | 274 | 402 | 675 | 0 |
| DY292040 | 359 | 539 | 891 | 0 |
| JG703027 | 328 | 544 | 868 | 0 |
| GW866809 | 43 | 672 | 714 | 0.00000008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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