y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10003576 |
Family | GT41 |
Protein Properties | Length: 979 Molecular Weight: 109802 Isoelectric Point: 6.554 |
Chromosome | Chromosome/Scaffold: 536 Start: 45936 End: 53638 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 450 | 737 | 0 |
PSMPEAHANLASAYKDSGHVEAAVKCYRQSLLLRPDFPEATCNLLHTLQCVCSWEGRDKMFNEVEGIIRRQINSSALPSVQPFHAIAYPLDPMLALEISR KYAAHCSNIASRFALSPFNHPPPIPINHDHGNQRLRVGYVSSDFGNHPLSHLMGSVFGMHNRVNIEVFCYALSVNDGTEWRQRIQSEAERFIDVSTMSSD TIAKLINDDKIQILINLNGYTKGARNEIFAMRPAPVQVSYMGFPGTTGATYIDYLVTDEFVSPVQYAHIYSEKLVHLPHCYFVNDYRQ | |||
GT41 | 755 | 956 | 0 |
HKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILKRVPNSALWLLRFPAAGEMRLREYAVAQGVQPDQITFTDVAMKQEHIRRSALADLFLDTPLCNA HTTGTDILWAGLPMVTLPLEKMATRVAGSLCEATGLGEEMIVSSMQEYEERAVSLALNQSKLQALTNRLKSVRLTCPLFDTPRWVKNLDRAYMKMWSIYC AG |
Full Sequence |
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Protein Sequence Length: 979 Download |
MISLQNGVRV SARDEAATGF HVSSASSAGL APFFARDTSH HEVDEDTHLA LAHQMYKSGC 60 YKQALEHSHV LYERNPLRTD NLLLLGAVYF QLHDYDTCIA KNEEALRLEP RLAECYGNMA 120 NAWKEKGDND MAIRYYLVAI ELRPNYADAW SNLASAYTLK GRINDAAQCC RQALALNPLL 180 VDAHSNLGNL MKAQGLMQEA YKCYVEALQI QPTFAIAWSN LAGLLMQLGD MPRALQFYEE 240 AVKLKPSFPD VYLNLGNVYQ GLGRLQDAIT CYQHAIQIRP NYAIAYGNLA STYYEGGQLD 300 LAIHHFKQAI TIDPRYTEAY NNLGNVLKDL GGVNEAVQCY SQCLALQPSH PQALTNLGNI 360 YMDWNMPAAA ASYYKATLAV TTGLSAPFNN LAIIYKQQGN YADAISCYNE VLRIDPSAAD 420 GLVNRGNTYK EIGRVTEAIQ NYISAINVRP SMPEAHANLA SAYKDSGHVE AAVKCYRQSL 480 LLRPDFPEAT CNLLHTLQCV CSWEGRDKMF NEVEGIIRRQ INSSALPSVQ PFHAIAYPLD 540 PMLALEISRK YAAHCSNIAS RFALSPFNHP PPIPINHDHG NQRLRVGYVS SDFGNHPLSH 600 LMGSVFGMHN RVNIEVFCYA LSVNDGTEWR QRIQSEAERF IDVSTMSSDT IAKLINDDKI 660 QILINLNGYT KGARNEIFAM RPAPVQVSYM GFPGTTGATY IDYLVTDEFV SPVQYAHIYS 720 EKLVHLPHCY FVNDYRQASD NLIKNLDVLD PKCQHKRSDY GLPEDKFIFA CFNQLYKMDP 780 EIFNTWCNIL KRVPNSALWL LRFPAAGEMR LREYAVAQGV QPDQITFTDV AMKQEHIRRS 840 ALADLFLDTP LCNAHTTGTD ILWAGLPMVT LPLEKMATRV AGSLCEATGL GEEMIVSSMQ 900 EYEERAVSLA LNQSKLQALT NRLKSVRLTC PLFDTPRWVK NLDRAYMKMW SIYCAGKEPH 960 HFKVTENDLE FPYDRSSS* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3914 | Spy | 0.0002 | 161 | 319 | 171 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
pfam13844 | Glyco_transf_41 | 4.0e-72 | 757 | 950 | 195 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
COG3914 | Spy | 7.0e-101 | 389 | 953 | 575 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_187074.1 | 0 | 41 | 975 | 49 | 977 | SEC (secret agent); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002270163.1 | 0 | 13 | 975 | 33 | 986 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319130.1 | 0 | 44 | 972 | 1 | 923 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325368.1 | 0 | 98 | 975 | 2 | 873 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522031.1 | 0 | 1 | 975 | 1 | 979 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gz6_D | 0 | 348 | 735 | 6 | 390 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 4gz6_D | 0 | 757 | 962 | 514 | 718 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 4gz6_D | 6e-28 | 178 | 328 | 6 | 156 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 4gz6_D | 1e-27 | 110 | 260 | 6 | 156 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 4gz6_D | 7e-26 | 144 | 290 | 6 | 152 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795247 | 468 | 508 | 975 | 0 |
HO778725 | 455 | 521 | 975 | 0 |
HO798232 | 427 | 26 | 452 | 0 |
HO798232 | 314 | 171 | 484 | 0 |
HO795247 | 85 | 458 | 536 | 2e-18 |
Sequence Alignments (This image is cropped. Click for full image.) |
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