Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10003621 |
Family | AA3 |
Protein Properties | Length: 760 Molecular Weight: 83036.8 Isoelectric Point: 6.4562 |
Chromosome | Chromosome/Scaffold: 1099 Start: 121861 End: 124301 |
Description | Long-chain fatty alcohol dehydrogenase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 234 | 758 | 3.08286e-44 |
QVTEDRDQDTLKIRCDAVIVGSGCGGGVAAAILASSGLKVIVLEKGNYFTSEDYSLLEGPSLEELYECGGKMSTSNGETSILAGSTVGGGTAVNWSACIK TPDSVLRDWSEDHKLPLFGSLEYREAVEAVWKRIGVTDNCKEEGFQNQVLRKGCENLGLKVEPVSRNSSEDHYCGSCSYGCRTGDKRGTDTTWLVDAVKN DAVIITGCKAEQFVLADDDGGRKKRCLGVVARSLNPKLEKKKLHIEAQVTVSAGGALLTPPLMIASGLKNPHIGQNLHLHPVLMAWGYFPEQESPNLKGK MYEGGIITSIHKMDSSDDSSNNTTAIIECATVGPASYAASSPWTSGRDLKEKMVKYPRTAVLFALVRDRGSGEVKVEGKITHQLDKQDKENLRTGLRQVL RIMVAAGAAEVGTYCSDGQRIKCQGMTEKDFELFLDSVVVNGGGLQSTDTNWMAFFSAHQMGSCRMGATEEDGGVDENGESWEAKGLFVCDGSLLPSAIG VNPMITIQSTAFCIANRIAESLKKR |
Full Sequence |
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Protein Sequence Length: 760 Download |
MKETMEGKTE ICQPHTLLRG SSSSYSHGFS PDQMKSLSAI CEAFLPPLTL SEKDGILKGI 60 PFERQQALLS FCEASGSDAP IPDEVAELMV KRNTPEGVLL MKLAFKLLSS RFGTLLLAGV 120 SSLDWKWPFI HNFSELPLEK REQILRKWRG EKLFTPLRVV FAMTKVFSLF VFFSRIDETL 180 KNPAWEAIGY RVDDARKITS KRKGERPLEK GIVETIHQDD YTSLIQSLVE KGVQVTEDRD 240 QDTLKIRCDA VIVGSGCGGG VAAAILASSG LKVIVLEKGN YFTSEDYSLL EGPSLEELYE 300 CGGKMSTSNG ETSILAGSTV GGGTAVNWSA CIKTPDSVLR DWSEDHKLPL FGSLEYREAV 360 EAVWKRIGVT DNCKEEGFQN QVLRKGCENL GLKVEPVSRN SSEDHYCGSC SYGCRTGDKR 420 GTDTTWLVDA VKNDAVIITG CKAEQFVLAD DDGGRKKRCL GVVARSLNPK LEKKKLHIEA 480 QVTVSAGGAL LTPPLMIASG LKNPHIGQNL HLHPVLMAWG YFPEQESPNL KGKMYEGGII 540 TSIHKMDSSD DSSNNTTAII ECATVGPASY AASSPWTSGR DLKEKMVKYP RTAVLFALVR 600 DRGSGEVKVE GKITHQLDKQ DKENLRTGLR QVLRIMVAAG AAEVGTYCSD GQRIKCQGMT 660 EKDFELFLDS VVVNGGGLQS TDTNWMAFFS AHQMGSCRMG ATEEDGGVDE NGESWEAKGL 720 FVCDGSLLPS AIGVNPMITI QSTAFCIANR IAESLKKRR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03970 | Rv0697 | 0.0003 | 690 | 755 | 67 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 1.0e-19 | 618 | 744 | 133 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 3.0e-23 | 266 | 753 | 551 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam00732 | GMC_oxred_N | 2.0e-88 | 296 | 515 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0016491 | oxidoreductase activity |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF22878.1 | 0 | 25 | 757 | 1 | 718 | alcohol oxidase [Glycine max] |
EMBL | CAN71289.1 | 0 | 12 | 758 | 5 | 738 | hypothetical protein [Vitis vinifera] |
EMBL | CAP15763.1 | 0 | 8 | 758 | 3 | 749 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
RefSeq | XP_002285334.1 | 0 | 12 | 758 | 5 | 738 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002529832.1 | 0 | 5 | 757 | 1 | 743 | electron carrier, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3t37_A | 0.000001 | 248 | 730 | 18 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
PDB | 3cnj_A | 0.0003 | 689 | 751 | 437 | 494 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
PDB | 2gew_A | 0.0003 | 689 | 751 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
PDB | 1n4w_A | 0.0003 | 689 | 751 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
PDB | 1n4v_A | 0.0003 | 689 | 751 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794753 | 750 | 15 | 755 | 0 |
HO779224 | 445 | 223 | 665 | 0 |
FN753067 | 278 | 268 | 545 | 0 |
EX275136 | 295 | 454 | 748 | 0 |
ES815664 | 324 | 348 | 669 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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