| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10003708 |
| Family | CE11 |
| Protein Properties | Length: 394 Molecular Weight: 42874.6 Isoelectric Point: 6.869 |
| Chromosome | Chromosome/Scaffold: 1042 Start: 114888 End: 117057 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 78 | 355 | 0 |
| QQTLARSLELTGVGLHSGKSSNVRISPEHVGKGRTFDFNSKWSILASVDFALRPSPLCTTLSKDGVSIRTVEHLLSALEATGVDNCRIQIDSADSDDSEV EVPILDGSALKWVDLIREVGVRVAVDEHGCSCERLAPHLNEPYHVRNGDAFVAVFPSPELRITYGIHFPQVSAIGSQWVTFSSFDDSMYVKEIASARTFC LHEQVEQMRNAGLIKGGSLENAIVCSATEGWINGPLRFPDEPCRHKVLDLIGDLSLLAQSGNQGLPVAHIVAYKASKQ | |||
| Full Sequence |
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| Protein Sequence Length: 394 Download |
| MGIKPLTRLN IQLELGSFIF RSGRAWLDRK NCSSGSGQHE HDCFYCLKIS VKTNAAELRT 60 QMALTRGIIS WKSTGRVQQT LARSLELTGV GLHSGKSSNV RISPEHVGKG RTFDFNSKWS 120 ILASVDFALR PSPLCTTLSK DGVSIRTVEH LLSALEATGV DNCRIQIDSA DSDDSEVEVP 180 ILDGSALKWV DLIREVGVRV AVDEHGCSCE RLAPHLNEPY HVRNGDAFVA VFPSPELRIT 240 YGIHFPQVSA IGSQWVTFSS FDDSMYVKEI ASARTFCLHE QVEQMRNAGL IKGGSLENAI 300 VCSATEGWIN GPLRFPDEPC RHKVLDLIGD LSLLAQSGNQ GLPVAHIVAY KASKQNSFPD 360 LSGGHALHSD FVRGLAESFV PDYAKGLLAL SSS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 2.0e-60 | 78 | 375 | 336 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 7.0e-75 | 78 | 376 | 303 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 6.0e-90 | 78 | 377 | 311 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 3.0e-90 | 78 | 377 | 304 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 9.0e-106 | 78 | 377 | 305 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26831.1 | 0 | 65 | 376 | 12 | 310 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173874.2 | 0 | 58 | 375 | 19 | 323 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 65 | 351 | 12 | 296 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315856.1 | 0 | 75 | 352 | 4 | 280 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526001.1 | 0 | 65 | 351 | 12 | 302 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3uhm_A | 2e-34 | 78 | 375 | 4 | 274 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3u1y_B | 2e-34 | 78 | 375 | 4 | 274 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3u1y_A | 2e-34 | 78 | 375 | 4 | 274 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3p3e_A | 2e-34 | 78 | 375 | 4 | 274 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 2ves_C | 2e-34 | 78 | 375 | 4 | 274 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GW868070 | 198 | 189 | 386 | 0 |
| CK277774 | 273 | 68 | 340 | 0 |
| GT006630 | 268 | 74 | 340 | 0 |
| GE608060 | 271 | 65 | 335 | 0 |
| EL383503 | 280 | 65 | 343 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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