Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10003933 |
Family | CE8 |
Protein Properties | Length: 582 Molecular Weight: 64008.3 Isoelectric Point: 7.3416 |
Chromosome | Chromosome/Scaffold: 247 Start: 110721 End: 116480 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 269 | 565 | 0 |
NVVVAADGSGDFATVEEAVAAAPNKSKERFIIKIKAGVYRENVEVTKSKTNLMFLGDGRATTIITASRNVADGFTTFKSATVAVVGQGFLARDITFQNTA GPQKHQAVALRVGADLAAFYNCDILAYQDTLYVHSNRQFFINCLIAGTVDFIFGNAAVVIQDCDIHARLPGPGQKNMITAQGRKDPNQNTGIVIQKSRIG ATSDLLSAPNNSFPTYLGRPWKEFSRTVIMQSSISDVVHSSGWHEWNGEFALATLVYREFSNSGPGSNTSERVKWEGYKVMSNETEAAAFTPDNFIA |
Full Sequence |
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Protein Sequence Length: 582 Download |
MTVLPLLLVA TFTAETAPSA AASPTNYYNQ YHLPPTSTIP TTAATPHHAL LRSACSNTLY 60 SDLCFSAVAT IPGAAEALTT QKDVIEASIN LTCSAVQRNF FTVESLIKDP RRRRRKNKRE 120 MTALHDCLET IDETLDELHV ALRDLNEYPN KKPLTQHAAD LKTLLSAAMT NQETCLDGFS 180 HDGADKRVRE ALLQGQTHVE RMCSNSLAMI INMTESDIRE DRRRRLSQIR GRKVAEFRKE 240 SSAEEKWPEW VSAGDRRLLQ ATEEEVKPNV VVAADGSGDF ATVEEAVAAA PNKSKERFII 300 KIKAGVYREN VEVTKSKTNL MFLGDGRATT IITASRNVAD GFTTFKSATV AVVGQGFLAR 360 DITFQNTAGP QKHQAVALRV GADLAAFYNC DILAYQDTLY VHSNRQFFIN CLIAGTVDFI 420 FGNAAVVIQD CDIHARLPGP GQKNMITAQG RKDPNQNTGI VIQKSRIGAT SDLLSAPNNS 480 FPTYLGRPWK EFSRTVIMQS SISDVVHSSG WHEWNGEFAL ATLVYREFSN SGPGSNTSER 540 VKWEGYKVMS NETEAAAFTP DNFIAGGSWL RPTNFPFSLG L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 4.0e-165 | 123 | 581 | 473 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 5.0e-167 | 54 | 581 | 535 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-178 | 120 | 581 | 462 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 52 | 581 | 534 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 269 | 566 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC01624.1 | 0 | 48 | 581 | 60 | 579 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
Swiss-Prot | P83948 | 0 | 46 | 581 | 64 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265171.1 | 0 | 45 | 581 | 91 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 48 | 581 | 60 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326621.1 | 0 | 48 | 581 | 60 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 266 | 581 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 269 | 581 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-25 | 280 | 517 | 18 | 285 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-25 | 280 | 517 | 18 | 285 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-25 | 280 | 517 | 18 | 285 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |