| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10003934 |
| Family | CE8 |
| Protein Properties | Length: 651 Molecular Weight: 71098.7 Isoelectric Point: 6.3371 |
| Chromosome | Chromosome/Scaffold: 247 Start: 119332 End: 122449 |
| Description | pectinesterase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 299 | 368 | 3.8e-22 |
| NVTVAKDGTGNFTTIREAVPGIPKKSQWRYVIYIKEGVYKENVILEKQLWNVVVYGDGKDKTVISGSLNF | |||
| CE8 | 372 | 635 | 0 |
| VIYIKEGVYKENVILEKHLWNVVVYGDGKDKTVISGSLNFIDGTPTFSTPTFAAVGKGFMARDIKFINTAGPSKHQAVAFRSGADMSVYYKCAFDAYQDT LYPHSNRQFYKDCDITGTIDFIFGNAAVVFQGCNIMPRQPLPNQFNTITAQGKKDPNQNTGISIQKCSFFPLEKNLTARTYLGRPWKDFSTTVIMQSSID GFVSPLGWLSWVSGVDPPNTIFYAEYQNTGPGSGLAGRVKWAGYRPGLTSDEAGKFTVESFLHG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 651 Download |
| MDTMKSFKGY GKVDEAEELA FRQKTRRRYI IFGVSSVILL AVIIAAVAGV VVHNRKSGNG 60 SSSDADKLPP TESPAASLKA VCSVTEYPAS CYSSILELEA GSNSSDPELL FKLSLQVAMN 120 ELSKLKDLPS KIQIPENDTA IQLAVEVCST VFDDSVDRLN DSIAAMAADA EGGGGQNKQM 180 LSKERIDDLK TWLSTAVTDL DTCLDAMQLN ETEHSGSEAI LQQLTTAMEN STEFVSNSLA 240 IVNKVMSLLS DFNIPIHKRR KLLTDSPSDL KLGFPRWLSG GDRRLLQEIG HGSGAIKPNV 300 TVAKDGTGNF TTIREAVPGI PKKSQWRYVI YIKEGVYKEN VILEKQLWNV VVYGDGKDKT 360 VISGSLNFID GVIYIKEGVY KENVILEKHL WNVVVYGDGK DKTVISGSLN FIDGTPTFST 420 PTFAAVGKGF MARDIKFINT AGPSKHQAVA FRSGADMSVY YKCAFDAYQD TLYPHSNRQF 480 YKDCDITGTI DFIFGNAAVV FQGCNIMPRQ PLPNQFNTIT AQGKKDPNQN TGISIQKCSF 540 FPLEKNLTAR TYLGRPWKDF STTVIMQSSI DGFVSPLGWL SWVSGVDPPN TIFYAEYQNT 600 GPGSGLAGRV KWAGYRPGLT SDEAGKFTVE SFLHGSTWLP ATSVAFDSTL * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 4.0e-147 | 55 | 650 | 602 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 9.0e-150 | 7 | 643 | 657 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-178 | 299 | 636 | 342 | + Pectinesterase. | ||
| PLN02314 | PLN02314 | 0 | 1 | 650 | 651 | + pectinesterase | ||
| PLN02468 | PLN02468 | 0 | 7 | 650 | 648 | + putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65650.1 | 0 | 1 | 644 | 1 | 581 | pectinesterase, putative [Arabidopsis thaliana] |
| Swiss-Prot | Q43111 | 0 | 1 | 650 | 1 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
| RefSeq | XP_002265217.1 | 0 | 1 | 650 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304256.1 | 0 | 1 | 650 | 1 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532945.1 | 0 | 1 | 650 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 293 | 646 | 2 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 296 | 646 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.00000000000005 | 372 | 640 | 36 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000005 | 372 | 640 | 36 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000009 | 372 | 640 | 36 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
