| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10003968 |
| Family | CE8 |
| Protein Properties | Length: 565 Molecular Weight: 61664.1 Isoelectric Point: 8.3435 |
| Chromosome | Chromosome/Scaffold: 437 Start: 66621 End: 68315 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 252 | 546 | 0 |
| AVVAKDGSGKFKSIGAALAAYPKNFKGRYVIYVKAGVYSEQVTVGKGMKNVYMYGDGPRKSIITGHLSFAKDGLGTWKTASFVVEADGFIARSMGFQNTA GPEGHQAVAVRSLSDQSAFINCRLDGFQDTLCYQGGRQFFRNCVLSGTIDFLFGYGSVVVQNSLIIVRKPMDNQFNTVTADGRKEKGQPTGIVIHNCRIV PEAKLVADRFKLKTYLGRPWKAYSTTVVMESELGDLIQPDGWKEWDGTQFIDTLYYAEYANRGPGANTARRLKWKTIRFLSKNEAMKWTVESFLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MAGKVVIPAV GLLLVVGIVI GVVAVVHRDG GETESVTSHS KAVTEICQPT NYKEECMKSL 60 SSANSTDPKD LIKAGILAVA ESVKKSFNLS DDLVAKAEKE SKRTKTALSD CKELLEDANE 120 KLQDIIEKVG GSDITTIANR SDDFRTWLSY VIGYQELCID GFDQDSEVRA DVRQSTEVGS 180 QLTDNVLEIL AGIQKVLGSF GLKLNLSSIT GGAGDEGDHH RRLLSEENGY PTWMSAADRK 240 LLASNPNLTP NAVVAKDGSG KFKSIGAALA AYPKNFKGRY VIYVKAGVYS EQVTVGKGMK 300 NVYMYGDGPR KSIITGHLSF AKDGLGTWKT ASFVVEADGF IARSMGFQNT AGPEGHQAVA 360 VRSLSDQSAF INCRLDGFQD TLCYQGGRQF FRNCVLSGTI DFLFGYGSVV VQNSLIIVRK 420 PMDNQFNTVT ADGRKEKGQP TGIVIHNCRI VPEAKLVADR FKLKTYLGRP WKAYSTTVVM 480 ESELGDLIQP DGWKEWDGTQ FIDTLYYAEY ANRGPGANTA RRLKWKTIRF LSKNEAMKWT 540 VESFLRGREW VANTGANVIY GLKA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-152 | 30 | 555 | 531 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 9.0e-155 | 36 | 554 | 526 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 6.0e-156 | 27 | 555 | 551 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 2.0e-162 | 251 | 547 | 298 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 0 | 32 | 562 | 547 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002298185.1 | 0 | 28 | 563 | 28 | 557 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002298186.1 | 0 | 29 | 563 | 33 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303172.1 | 0 | 27 | 563 | 29 | 559 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304074.1 | 0 | 32 | 563 | 34 | 555 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528620.1 | 0 | 28 | 563 | 28 | 556 | Pectinesterase-4 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 250 | 554 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 248 | 562 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-20 | 249 | 486 | 3 | 258 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-20 | 249 | 486 | 3 | 258 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-20 | 249 | 486 | 3 | 258 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
