| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10004233 |
| Family | GH47 |
| Protein Properties | Length: 397 Molecular Weight: 44899.9 Isoelectric Point: 6.2689 |
| Chromosome | Chromosome/Scaffold: 122 Start: 27717 End: 29917 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 3 | 300 | 0 |
| GETAETSTSGCGSLILEMGALSRLTGDPRYEFAALRALRKLWSMRSSLNLFGTTLDVTTGQWIEHSSGIGAGVDSFYEYLVKAHILFGECSRLLIKLCRS TSDMAHGMHEEAVSVLYHEADMRSGTATYWQLISLQAFWPGLQASSSCFNIIFRVLVGDIPAANSSHREFFSVWEKFGVLPERYLLDYKIVHPTEKYYPL RPELAESTFYLYHATKDPWYLEVGEAMVNSLNLYTKVEGGFASIKDVTTMQREDHQYILLSNITAWWKRCKYLYLLFDDSFLADGNYVFTTEGHPLPV | |||
| Full Sequence |
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| Protein Sequence Length: 397 Download |
| MEGETAETST SGCGSLILEM GALSRLTGDP RYEFAALRAL RKLWSMRSSL NLFGTTLDVT 60 TGQWIEHSSG IGAGVDSFYE YLVKAHILFG ECSRLLIKLC RSTSDMAHGM HEEAVSVLYH 120 EADMRSGTAT YWQLISLQAF WPGLQASSSC FNIIFRVLVG DIPAANSSHR EFFSVWEKFG 180 VLPERYLLDY KIVHPTEKYY PLRPELAEST FYLYHATKDP WYLEVGEAMV NSLNLYTKVE 240 GGFASIKDVT TMQREDHQYI LLSNITAWWK RCKYLYLLFD DSFLADGNYV FTTEGHPLPV 300 RSDWHDQLPE AYIPSNWTYI KSPVSTQRAS AMTRQGCPAT SLNLGDGRQP IESVCHIIDT 360 HSDHRCLRNE ECGVDATSCR RRSCSMSGYC GLWLRP* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 2.0e-28 | 9 | 300 | 317 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 2.0e-78 | 8 | 300 | 317 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002280345.1 | 0 | 1 | 394 | 197 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318019.1 | 0 | 1 | 394 | 162 | 528 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321565.1 | 0 | 1 | 394 | 198 | 565 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002454305.1 | 0 | 1 | 394 | 198 | 570 | hypothetical protein SORBIDRAFT_04g028330 [Sorghum bicolor] |
| RefSeq | XP_002511454.1 | 0 | 1 | 394 | 201 | 573 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 6e-23 | 14 | 300 | 176 | 465 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayr_A | 6e-23 | 7 | 298 | 157 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayq_A | 6e-23 | 7 | 298 | 157 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayp_A | 6e-23 | 7 | 298 | 157 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayo_A | 6e-23 | 7 | 298 | 157 | 433 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CJ683637 | 305 | 8 | 307 | 0 |
| DV452428 | 266 | 129 | 394 | 0 |
| EL371840 | 293 | 9 | 299 | 0 |
| EL481589 | 294 | 6 | 297 | 0 |
| CO107815 | 305 | 68 | 364 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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