Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10004271 |
Family | GH3 |
Protein Properties | Length: 793 Molecular Weight: 86505.3 Isoelectric Point: 6.5413 |
Chromosome | Chromosome/Scaffold: 1884 Start: 2893 End: 6078 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 76 | 347 | 0 |
GIPRLGIPTYQWWSESLHGIAINGPGITFQDGPVSAATQFPQVILSAAAFNRTLWFLIGASVGVEARAMHNVGQAGLTFWAPNVNVFRDPRWGRGQETPG EDPLVGSEYAVVYVKGLQSGGFDGNDGRRREERIGFGDHRVLGEEEDEVLMVSACCKHTTAYDLEDWGNFSRYSFNAVVTEQDMEDTFMPPFRGCVHEGK ATCLMCSYNQVNGVPACARKDLLEKARREWDMKGYIVSDCDAVGTIHEYQNYTKTTEEAVAITLKAGMDINC |
Full Sequence |
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Protein Sequence Length: 793 Download |
MSLHNLHFLF SFIFFIFFAS TTAKEPIFLH YPCSPPNHNH YQFCNKSLTI QSRAHSLISH 60 LTLSEKAQQL SDNATGIPRL GIPTYQWWSE SLHGIAINGP GITFQDGPVS AATQFPQVIL 120 SAAAFNRTLW FLIGASVGVE ARAMHNVGQA GLTFWAPNVN VFRDPRWGRG QETPGEDPLV 180 GSEYAVVYVK GLQSGGFDGN DGRRREERIG FGDHRVLGEE EDEVLMVSAC CKHTTAYDLE 240 DWGNFSRYSF NAVVTEQDME DTFMPPFRGC VHEGKATCLM CSYNQVNGVP ACARKDLLEK 300 ARREWDMKGY IVSDCDAVGT IHEYQNYTKT TEEAVAITLK AGMDINCGSA VSLHAESAIA 360 QGILQEKDID RALLNLFSIQ FRLGLYDGDP RQGKFGKLGP KDVCSKEHRM LALEAARQGI 420 VLLKNDRSFL PLISGDVSSL AVIGPLANNR TNIGGDYTGY SCEPQSLYEG LKGYAKKTTF 480 AGGCADVPCV SDAQFDEAVR VAKKADFVIV VAGLDLSQET EDHDRVSLLL PGKQMSLVLS 540 VASASKNPII LVLTGGGPID VSFAKADPRI SSILWIGYPA EAGPKALAEA IFGEYNPGGR 600 LPMTWYPESF TKVPMNIMNM RADPAQGYPG RTYRFYTGDQ VYSFGHGLSY INYTYSLLST 660 PNKLTLLGSS TTRKRILTGS KPTGYVHVDD ILQSCNSLKF YVVASVTNAG QVDGSHVILL 720 FARVPEATKG TPLKQLVGFD RVHTVSGGST ETSILVDPCK HLSVADEGGR RVMPLGNHVL 780 MLGDLEHTVA VV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-46 | 76 | 458 | 390 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-53 | 54 | 372 | 327 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-54 | 420 | 650 | 236 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-67 | 113 | 758 | 695 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 4 | 791 | 792 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 63 | 791 | 2 | 730 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 7 | 791 | 6 | 766 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 6 | 791 | 1 | 790 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 7 | 791 | 6 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 30 | 791 | 29 | 777 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 155 | 758 | 128 | 698 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3u48_A | 0 | 155 | 758 | 128 | 698 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3u4a_B | 0 | 155 | 758 | 128 | 698 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3u4a_A | 0 | 155 | 758 | 128 | 698 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2x41_A | 9e-33 | 52 | 783 | 2 | 699 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |