Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10004391 |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 49454.6 Isoelectric Point: 4.6412 |
Chromosome | Chromosome/Scaffold: 2593 Start: 191631 End: 193007 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 452 | 1.7e-32 |
WCVADPKAGGEKLQAAIDYACGEGQADCIPIQEGATCYDPNTLEAHASYAFNSYYQMNHRVYGTCHFGGAAYVVSQPPRYGRC | |||
GH17 | 31 | 348 | 0 |
IGVNYGRLANDLPSPAQVVELLKSQGITRVKIFDTNSDVLTALASSNISVTVCVPNEILSNVAADQTFADNWVHSNISPFYPSTKFETIAVGNEISSDPR NTTLYLVPAMKNIYNSLAKYSLTGSIKVSSPLDLNVLQNSYPPSSGSFKQELVDSVIKPMLSFLNQTGSYIMINAYPFFAYAANADKISLDYALFRPNSG VTDPGNGLKYYSLLEAQLDAVNAAMSAIQYGNVKMVVTETGWPSIGDEKEIGAGHENAKAYNGNLVNRVLTGNGTPLKPEEPLNVFLFALFNENEKPGPI SERNYGLFYPNQKKVYDI |
Full Sequence |
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Protein Sequence Length: 459 Download |
MAVFFNLSFI LMSSFILYSL PAEVAAGGGS IGVNYGRLAN DLPSPAQVVE LLKSQGITRV 60 KIFDTNSDVL TALASSNISV TVCVPNEILS NVAADQTFAD NWVHSNISPF YPSTKFETIA 120 VGNEISSDPR NTTLYLVPAM KNIYNSLAKY SLTGSIKVSS PLDLNVLQNS YPPSSGSFKQ 180 ELVDSVIKPM LSFLNQTGSY IMINAYPFFA YAANADKISL DYALFRPNSG VTDPGNGLKY 240 YSLLEAQLDA VNAAMSAIQY GNVKMVVTET GWPSIGDEKE IGAGHENAKA YNGNLVNRVL 300 TGNGTPLKPE EPLNVFLFAL FNENEKPGPI SERNYGLFYP NQKKVYDIAL TALTAEGDGG 360 VSSKSSTETW CVADPKAGGE KLQAAIDYAC GEGQADCIPI QEGATCYDPN TLEAHASYAF 420 NSYYQMNHRV YGTCHFGGAA YVVSQPPRYG RCDFPTGY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 6.0e-23 | 369 | 441 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-38 | 369 | 454 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-105 | 31 | 348 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM66024.1 | 0 | 26 | 458 | 22 | 460 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 26 | 458 | 22 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278044.1 | 0 | 1 | 458 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316783.1 | 0 | 29 | 458 | 2 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529472.1 | 0 | 25 | 458 | 25 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 31 | 348 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 31 | 348 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 31 | 348 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 31 | 348 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |