| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10004398 |
| Family | GH14 |
| Protein Properties | Length: 523 Molecular Weight: 58014 Isoelectric Point: 7.1087 |
| Chromosome | Chromosome/Scaffold: 209 Start: 38957 End: 40945 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 97 | 256 | 0 |
| FVMMPLDSVTMNNTMNRKKAMSVSLQALKRAGVEGIMVDVWWGLVERDAPGVYNWGGYSDLFEMANHLGLKVQAVMSFHQCGGNVGDSCNISLPNWVMEE MNKDQDLAYTDQWGRRNYEYLSLGSGTLPVLQGRSPIQCYAGFMSAFRDQFKNLLGHTIV | |||
| GH14 | 264 | 475 | 0 |
| LAGKPEWGNSGPTDAGQYNNWPEDTQFFRKDNGGWTSPYGEFFLSWYSKMLLDHGERIMPSATSIFNNDDRKISVKVAGIHWHYGSQSHAPELTAGYYST KNHNGYLPIARMLARQGAIFNFTCIEMRDHEQPHDALCAPEKLVKQVALAIRDTQVGLAGENALPRYDLYAHEQILHVSSLKIGDNDERKRCAFTYLRMN PTLFEADNWRPF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 523 Download |
| MAIKVAHQLG ALQGSRLLVQ TIPDACPLLV NRTSQRIELA EQRSPPAILG CNGGEGKRAS 60 TLVARSALAT PETVAGESMM HREGGGSNHA SNGVPVFVMM PLDSVTMNNT MNRKKAMSVS 120 LQALKRAGVE GIMVDVWWGL VERDAPGVYN WGGYSDLFEM ANHLGLKVQA VMSFHQCGGN 180 VGDSCNISLP NWVMEEMNKD QDLAYTDQWG RRNYEYLSLG SGTLPVLQGR SPIQCYAGFM 240 SAFRDQFKNL LGHTIVLGSL ELQLAGKPEW GNSGPTDAGQ YNNWPEDTQF FRKDNGGWTS 300 PYGEFFLSWY SKMLLDHGER IMPSATSIFN NDDRKISVKV AGIHWHYGSQ SHAPELTAGY 360 YSTKNHNGYL PIARMLARQG AIFNFTCIEM RDHEQPHDAL CAPEKLVKQV ALAIRDTQVG 420 LAGENALPRY DLYAHEQILH VSSLKIGDND ERKRCAFTYL RMNPTLFEAD NWRPFVGLVK 480 KMKEGQGANR CAEQLEREAK HFVHIREPLL VREVDAVVAA VL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 3.0e-95 | 42 | 482 | 488 | + beta-amylase | ||
| PLN02161 | PLN02161 | 5.0e-98 | 94 | 482 | 440 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-135 | 92 | 486 | 440 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 1 | 510 | 569 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 72 | 490 | 460 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71375.1 | 0 | 3 | 510 | 1 | 561 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285569.1 | 0 | 2 | 510 | 3 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311706.1 | 0 | 3 | 510 | 1 | 553 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314522.1 | 0 | 92 | 510 | 5 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518196.1 | 0 | 1 | 510 | 1 | 565 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 92 | 482 | 4 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgi_A | 0 | 88 | 482 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgb_A | 0 | 88 | 482 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xg9_A | 0 | 88 | 482 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xfy_A | 0 | 88 | 482 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779314 | 401 | 152 | 510 | 0 |
| HO826564 | 402 | 150 | 510 | 0 |
| HO798206 | 339 | 214 | 510 | 0 |
| JG075749 | 212 | 299 | 510 | 0 |
| DT555349 | 320 | 181 | 458 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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