| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10004484 |
| Family | GH2 |
| Protein Properties | Length: 918 Molecular Weight: 103036 Isoelectric Point: 6.3962 |
| Chromosome | Chromosome/Scaffold: 768 Start: 103923 End: 107661 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 41 | 543 | 0 |
| SPWMEAVVPGSVLATLVKNKVVPDPFYGLENEAILDIADSGREHYTFWFFTTFECKLSENQYLDLNFRGVNYSAEVYLNGHHMALPKGMFRRHSLDATKI LSSKGTNLLAVLVHPPDHPGKIPPEGGQGGDHEIGKDVTTQYVEGWDWICPIRDRNTGIWDEVSISITGPVKIIDSHLVSTFYDNYTRVYLHAAVELENR SSSVAGCNVNIQVTTDLEGGVCLVEHLQTQFLAIAAGKRVQYSFPELFFYKPNLWWPNGMGKQALYNVTITANLEGQGESDTWNQLFGFRKIESTIDSST GGRLFKVNGQPIFIRGGNWIVSDGLLRLSRKRYQTDIKFHADMNFNMIRCWGGGLAERPDFYHFCDVYGILVWQEFWIAGDVDGRGVPVSNPDGPLDHDL FLFCARDTVKLLRNHPSLTLWVGGNEQVPPPDINNALKKDLQLMPEFQSSEIKTPSEHDDSPSVSQSLSDYLDGTRVYVQGSMWDGFADGKGNFTDGPYE IQN | |||
| Full Sequence |
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| Protein Sequence Length: 918 Download |
| MAMEIGRKVL DSGWIAARST EVKLTGTQLT TTNPPAIGPK SPWMEAVVPG SVLATLVKNK 60 VVPDPFYGLE NEAILDIADS GREHYTFWFF TTFECKLSEN QYLDLNFRGV NYSAEVYLNG 120 HHMALPKGMF RRHSLDATKI LSSKGTNLLA VLVHPPDHPG KIPPEGGQGG DHEIGKDVTT 180 QYVEGWDWIC PIRDRNTGIW DEVSISITGP VKIIDSHLVS TFYDNYTRVY LHAAVELENR 240 SSSVAGCNVN IQVTTDLEGG VCLVEHLQTQ FLAIAAGKRV QYSFPELFFY KPNLWWPNGM 300 GKQALYNVTI TANLEGQGES DTWNQLFGFR KIESTIDSST GGRLFKVNGQ PIFIRGGNWI 360 VSDGLLRLSR KRYQTDIKFH ADMNFNMIRC WGGGLAERPD FYHFCDVYGI LVWQEFWIAG 420 DVDGRGVPVS NPDGPLDHDL FLFCARDTVK LLRNHPSLTL WVGGNEQVPP PDINNALKKD 480 LQLMPEFQSS EIKTPSEHDD SPSVSQSLSD YLDGTRVYVQ GSMWDGFADG KGNFTDGPYE 540 IQNPESFFKD DFYKYGFNPE VGSVGMPVAA TIRATMPPEG WLIPLFNKQA DGYIEEVPNP 600 IWNYHKYIPY SKPSNKVHDQ ILLYSVPTDL DDFCLKAQLV NYIQYRALLG AAKPRHLFHR 660 EASVWDLDGT CPYYKVHKDL SFPSKKTTRV AEMKYPSSKN PKPAFFLLLK LYNTSDYKIL 720 SRNFYWLHLP GSDYTSLQDP FRKKKIPLKL TTQTFISGRA YEMEVLVQNK SSSSTSSTHK 780 NNFVVAAADD GADYDSNAEL QLRVLDGNGK KDGLFRTLSR MFAATEGSSS SSKVSSEVNG 840 SNVGVAFFLQ FSVHAEKSRY EEGEDTRILP VHYSDNYFSL VPGEEMTVKI SFEVPPGVTP 900 RVTLHGWNYP GGHTVHH* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 7.0e-7 | 195 | 466 | 299 | + beta-D-galactosidase; Reviewed | ||
| PRK10150 | PRK10150 | 2.0e-7 | 38 | 466 | 457 | + beta-D-glucuronidase; Provisional | ||
| pfam00703 | Glyco_hydro_2 | 3.0e-8 | 211 | 330 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 2.0e-16 | 100 | 466 | 385 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 3.0e-36 | 45 | 466 | 429 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE97370.1 | 0 | 4 | 915 | 3 | 944 | endo-beta-mannosidase [Brassica oleracea] |
| RefSeq | NP_563833.2 | 0 | 4 | 915 | 3 | 942 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| Swiss-Prot | Q5H7P5 | 0 | 5 | 913 | 1 | 949 | EBM_LILLO RecName: Full=Mannosylglycoprotein endo-beta-mannosidase; Short=Endo-beta-mannosidase; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 42 kDa subunit |
| RefSeq | XP_002319539.1 | 0 | 4 | 916 | 3 | 973 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002439742.1 | 0 | 1 | 915 | 1 | 976 | hypothetical protein SORBIDRAFT_09g019350 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 3e-36 | 39 | 908 | 77 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 3e-36 | 39 | 908 | 77 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 1e-35 | 39 | 908 | 77 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_A | 1e-35 | 39 | 908 | 77 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x05_B | 1e-35 | 39 | 908 | 77 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO871600 | 338 | 302 | 636 | 0 |
| DY284833 | 302 | 1 | 302 | 0 |
| ES818807 | 293 | 161 | 453 | 0 |
| FC918235 | 295 | 1 | 295 | 0 |
| ES818807 | 129 | 445 | 562 | 0.00004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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