Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10004717 |
Family | GT8 |
Protein Properties | Length: 491 Molecular Weight: 55051.1 Isoelectric Point: 7.6881 |
Chromosome | Chromosome/Scaffold: 2057 Start: 12276 End: 15576 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 57 | 277 | 1e-29 |
YEFYVATRVLLRSLRSLSVDADLVVIASLDVPPRWVQALEKEDGARVVSVENVNNPYKDQSNFDHRFKLTLNKLYAWSLVDYERVVMLDADNLFLRNTDE LFQCGQFCAAFINPCIFHTGLFVLQPSNEVFKDMLHQLEVGKDNPDGADQGFIGGYFPDLLDKPLFHPPAHGSVVADGSYRLPLGYQMDASYYYLRLRWN VPCGPNSVITFPGASWLKPWY |
Full Sequence |
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Protein Sequence Length: 491 Download |
MLSCNGLLLF FFLALAVLGG SETAAFGPEK EMMVHQLWPK HRNAYATMMY MGTPRDYEFY 60 VATRVLLRSL RSLSVDADLV VIASLDVPPR WVQALEKEDG ARVVSVENVN NPYKDQSNFD 120 HRFKLTLNKL YAWSLVDYER VVMLDADNLF LRNTDELFQC GQFCAAFINP CIFHTGLFVL 180 QPSNEVFKDM LHQLEVGKDN PDGADQGFIG GYFPDLLDKP LFHPPAHGSV VADGSYRLPL 240 GYQMDASYYY LRLRWNVPCG PNSVITFPGA SWLKPWYWWS WPVLPLGIDW HEKRRQHLGY 300 GAEMPMVVIQ SILYLGIIAV TRLARPNLTK LCYRGSSDKN IISSLQSGLK VLSLWAILAA 360 YVTPFFIIPC TLHPLLGWSL YLLGTFALCS VAINAFMLPT IHVLTPWIGI FGVLLVMACP 420 WYTNGVVRAL SVFAYAFCAA PVLWISSTKV VASLQVSLER EAFFPKLGEY SSPSSSSSSS 480 SPRFGLNKLC * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5597 | COG5597 | 1.0e-5 | 120 | 224 | 119 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
PLN00176 | PLN00176 | 2.0e-6 | 86 | 232 | 184 | + galactinol synthase | ||
cd00505 | Glyco_transf_8 | 8.0e-11 | 116 | 237 | 149 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
pfam01501 | Glyco_transf_8 | 7.0e-11 | 86 | 215 | 164 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 1.0e-55 | 43 | 297 | 265 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67416.1 | 0 | 41 | 469 | 40 | 463 | OSIGBa0143N19.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC77769.1 | 0 | 41 | 469 | 40 | 463 | hypothetical protein OsI_16920 [Oryza sativa Indica Group] |
RefSeq | NP_565817.2 | 0 | 39 | 478 | 59 | 495 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
RefSeq | XP_002269578.1 | 0 | 23 | 474 | 19 | 466 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002528922.1 | 0 | 22 | 489 | 23 | 482 | glucosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 0.0000000000009 | 65 | 213 | 22 | 172 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u2x_A | 0.0000000000009 | 65 | 213 | 22 | 172 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u2v_B | 0.0000000000009 | 65 | 213 | 22 | 172 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u2v_A | 0.0000000000009 | 65 | 213 | 22 | 172 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u2u_B | 0.0000000000009 | 65 | 213 | 22 | 172 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |