Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10004967 |
Family | GT47 |
Protein Properties | Length: 593 Molecular Weight: 68538.7 Isoelectric Point: 7.7696 |
Chromosome | Chromosome/Scaffold: 2786 Start: 111651 End: 113429 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 143 | 486 | 0 |
CSGKYIYVHEIPSSFNYDVLLHCRTLSKWMNMCPYLSNFGLGPQIPNSDTKVVSNSGWYETNQFALEVIFHNRMKQYKCLTSDSTKASAIFVPYYAGLEV ARYLWSNNRLMRDHYSTELIKWIRGKPEWGRMFGRDHFLVAGRISWDFRRLTEKDEDWGNKLMVMPESKNMTMLTIESSPWNENDFAIPYPTDFHPSSDN QVTEWQRRMRRMKRRILFSFAGAPRPNLKNSIRNEIIEQCKSAKKKCQLLGCQPGSKKCDDPSNLLRMFQGSVFCLQPAGDSYTRRSTFDSILAGCIPVF FHPGSAYVQYLWHFPKDYTKYSVFIPGDEVKEGNANIERILSRI |
Full Sequence |
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Protein Sequence Length: 593 Download |
MEMPVGTRIR FWYFILVIFV VWIFLLAAYF SSTVINGGGG GSQSIATDRK IVAEIHETED 60 HQSSSSSAEE LYPVNSTVEN FFIGGEWDKY LQQEEQNQQN NPAKPIIHRH HRLNNRPNTI 120 RPKPAATVVS FPAAKDPDDS DQCSGKYIYV HEIPSSFNYD VLLHCRTLSK WMNMCPYLSN 180 FGLGPQIPNS DTKVVSNSGW YETNQFALEV IFHNRMKQYK CLTSDSTKAS AIFVPYYAGL 240 EVARYLWSNN RLMRDHYSTE LIKWIRGKPE WGRMFGRDHF LVAGRISWDF RRLTEKDEDW 300 GNKLMVMPES KNMTMLTIES SPWNENDFAI PYPTDFHPSS DNQVTEWQRR MRRMKRRILF 360 SFAGAPRPNL KNSIRNEIIE QCKSAKKKCQ LLGCQPGSKK CDDPSNLLRM FQGSVFCLQP 420 AGDSYTRRST FDSILAGCIP VFFHPGSAYV QYLWHFPKDY TKYSVFIPGD EVKEGNANIE 480 RILSRISKQR VATMREQVIK LIPGIVYADP RSNLENFEDA FDITVDGVLE RIEGLRKDLK 540 EGKILEVSEE EEETNWKKSV FGSVGKPHPW DHFFIREKEW NHQGEDVNFR AN* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-63 | 142 | 486 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64889.1 | 0 | 139 | 562 | 296 | 717 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180468.1 | 0 | 112 | 576 | 258 | 719 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 139 | 574 | 89 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 140 | 581 | 121 | 562 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002313430.1 | 0 | 78 | 578 | 10 | 571 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |