Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005071 |
Family | GH35 |
Protein Properties | Length: 844 Molecular Weight: 94393.8 Isoelectric Point: 7.9665 |
Chromosome | Chromosome/Scaffold: 1982 Start: 199984 End: 205541 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 52 | 356 | 0 |
LIIRGKRELLFSGSIHYPRSTPDMWPKLLEDAKRGGINVIQTYTFWNIHEPDEGKFNFKGRFDVIKFLKMCGDHGLYVTIRFGPFIQGEWNHGALPYWLR EIPNIIFRCYNEPYMQHMERFVTMMVQKMKDAKLFAGQGGPIILAQIENEYNTVQLAYRELGDKYVQWAGNFAESLNVGVPWVMCKQRDAPDPVINACNG RHCGDTFPGPNKPNKPALWTENWTAQFRVFGDPPSQRSAEDTAFGVVRWFSKNGSLVNYYMYHGGTNLGRTAASFVTTRYYDEAPLDEFGLDRGPKYGHL KDVHK |
Full Sequence |
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Protein Sequence Length: 844 Download |
MSVRLSSRNT VAASATAFLV VVFFVLSPAV VVNAHDDNKE ELNGATYDAR SLIIRGKREL 60 LFSGSIHYPR STPDMWPKLL EDAKRGGINV IQTYTFWNIH EPDEGKFNFK GRFDVIKFLK 120 MCGDHGLYVT IRFGPFIQGE WNHGALPYWL REIPNIIFRC YNEPYMQHME RFVTMMVQKM 180 KDAKLFAGQG GPIILAQIEN EYNTVQLAYR ELGDKYVQWA GNFAESLNVG VPWVMCKQRD 240 APDPVINACN GRHCGDTFPG PNKPNKPALW TENWTAQFRV FGDPPSQRSA EDTAFGVVRW 300 FSKNGSLVNY YMYHGGTNLG RTAASFVTTR YYDEAPLDEF GLDRGPKYGH LKDVHKALNL 360 CKRALLWGTS TTSQRLNPDV EVRIYETPGT DVCSAFLTNN HTRNTHTVKF KGHDYYLPAR 420 SISILPDCKT VVLNTATIVA QHNSRNFYRS EVTNKLCWKM TTETIPSVLN VTSSTPMELY 480 FLTKDKTDYA WYTTTINLDP KDLSMKKDVL PVLRVASLGH AMLAFVNGVF IGSAHGSQID 540 KSFVLQKSIE LKPGINHISL LGTLIGLPDS GAYMEHRFAG PRGVSILGLN TGTLDLSLNG 600 WGHQVGLAGE ANEWFNEDGS KKGKWSDVPK GSKGCALTWY KTKFDAPEGD DPVAVSMHGM 660 IKGMIWINGE CIGRYWMSYV SPLGDPTQVE YHIPRSYLKP EDNLMVILEE EPANPANITI 720 LTVNRDTICS YVSELSPPSV RQWERKDDKF RPVGEEVRLG AHLRCPFGKK IAVVDFASYG 780 DPYGACGGFA LGTCNSPVSK QVVEQHCLGK DVCDVPMDKG QFEKSRDPCP QVHKTLAVQV 840 TCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-7 | 73 | 202 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 7.0e-17 | 763 | 842 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-18 | 47 | 202 | 167 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-140 | 51 | 358 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 46 | 842 | 826 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS76480.1 | 0 | 18 | 842 | 12 | 842 | beta-galactosidase [Gossypium hirsutum] |
GenBank | ACC60982.1 | 0 | 40 | 842 | 23 | 826 | beta-galactosidase 2 precursor [Petunia x hybrida] |
RefSeq | XP_002278545.1 | 0 | 20 | 842 | 7 | 829 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306183.1 | 0 | 32 | 842 | 21 | 826 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312963.1 | 0 | 44 | 842 | 30 | 825 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 6e-36 | 51 | 354 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.004 | 638 | 709 | 509 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-33 | 47 | 354 | 13 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-33 | 47 | 354 | 13 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |