y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005412 |
Family | GT20 |
Protein Properties | Length: 958 Molecular Weight: 107964 Isoelectric Point: 7.1605 |
Chromosome | Chromosome/Scaffold: 847 Start: 17015 End: 22438 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 76 | 544 | 0 |
RKQRLLVVANRLPVSATRKDEDSWHLDISVGGLVSALLGVKEFDARWIGWAGVHVPDETGQKALTEALAKKRCIPVFLDEDTVHQYYNGYCNNVLWPLFH YLGLPQEDRLSTTRSFQSQFDAYKRANRMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRMLPSRSELLRSVLEADLV GFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALDLPKVKESMRDLKQRFAGRKLMLGVDRLDMIKGIPQKILAFEAFLEE NPQWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGKFGTLTSVPIHHLDRSLDFTALVALYAVTDVALVTSLRDGMNLVSYEFVACQAAKKGVLI LSEFAGAAQSLGAGALLVNPWNISDVANSIRYALNMSEDEREKRFHHNFMHVTTHTSQEWAATFVSELN |
Full Sequence |
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Protein Sequence Length: 958 Download |
MPGNNFSHSP TTPRTRLERL LRERELRKSS RVPFSTDQEN GDGFSEAEFF AQDSILSNDE 60 SPEGSDGGSG QEVRPRKQRL LVVANRLPVS ATRKDEDSWH LDISVGGLVS ALLGVKEFDA 120 RWIGWAGVHV PDETGQKALT EALAKKRCIP VFLDEDTVHQ YYNGYCNNVL WPLFHYLGLP 180 QEDRLSTTRS FQSQFDAYKR ANRMFADVVN EHYEEGDVVW CHDYHLMFLP KCLKEHNSKM 240 KVGWFLHTPF PSSEIHRMLP SRSELLRSVL EADLVGFHTY DYARHFVSAC TRILGLEGTP 300 EGVEDQGRLT RVAAFPIGID SDRFIRALDL PKVKESMRDL KQRFAGRKLM LGVDRLDMIK 360 GIPQKILAFE AFLEENPQWR EKVVLLQIAV PTRTDVPEYQ KLTSQVHEIV GRINGKFGTL 420 TSVPIHHLDR SLDFTALVAL YAVTDVALVT SLRDGMNLVS YEFVACQAAK KGVLILSEFA 480 GAAQSLGAGA LLVNPWNISD VANSIRYALN MSEDEREKRF HHNFMHVTTH TSQEWAATFV 540 SELNDTVVEA QLRTRQVLPV LPVEDAIAHY SRSNNRLLIL GFNGSLTEPV DSSGRRGGQI 600 RELEPRLHPE LKEILKKLCD EAKTTVIVLS GSDRSVLDDN FDEYKMWLAA ENGMFLRLAM 660 GGEWMTTMPE TLNMDWVDSV KHVFEYFTER TPRSHFELRE TSLVWNYKYA DVEFGRLQAR 720 DMLQHLWTGP ISNASLDVVH GGRSVEVRAV GVTKGAAIDR ILGEIVHNKD MKAPIDYVLC 780 IGHFLAKDED IYTFFEPVLP MPPQITSRAT SPDPYGTSRA SKPKLPGGSR TPKSQVHLMK 840 QRSLSTLERS NFGISSWRRD DNRGGPSPGP ATVARSSSSS SSSRYEGSSV LDLNGDNYFS 900 CAVSKKRSNA RYLPATWVSR VGEETTIEAG HRQVQPPWLG RRLLLLRLGM KGLQFWT* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 0.002 | 888 | 912 | 25 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03064 | PLN03064 | 0 | 73 | 913 | 842 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 72 | 814 | 743 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PRK14501 | PRK14501 | 0 | 79 | 782 | 712 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
pfam00982 | Glyco_transf_20 | 0 | 78 | 545 | 474 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_177979.1 | 0 | 1 | 913 | 1 | 921 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002305707.1 | 0 | 21 | 913 | 1 | 878 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331300.1 | 0 | 1 | 913 | 1 | 903 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522296.1 | 0 | 1 | 916 | 1 | 897 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
RefSeq | XP_002531237.1 | 0 | 1 | 913 | 1 | 905 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uqu_B | 0 | 79 | 564 | 3 | 476 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqu_A | 0 | 79 | 564 | 3 | 476 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_B | 0 | 79 | 564 | 3 | 476 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1uqt_A | 0 | 79 | 564 | 3 | 476 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 2wtx_D | 0 | 79 | 555 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW069910 | 288 | 165 | 452 | 0 |
CV711307 | 293 | 77 | 369 | 0 |
CX546763 | 292 | 77 | 368 | 0 |
ES813375 | 394 | 440 | 828 | 0 |
CB651133 | 280 | 106 | 385 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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