Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005459 |
Family | CBM43 |
Protein Properties | Length: 324 Molecular Weight: 35651 Isoelectric Point: 8.1241 |
Chromosome | Chromosome/Scaffold: 847 Start: 204863 End: 206669 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 235 | 317 | 2.3e-33 |
WCVPRSDASDAALQRNIDYVCSSGVDCQPIQKGGACFNPNTVRAHASYAMNAYYQRSGRHDSDCDFSRTGFLTSDNPSDQACS | |||
GH17 | 1 | 206 | 0 |
MKAVHQALHLANLTDFIKVTTPHAFSFLAASRPASTGRFRRFDAAILRPILDFHLRTRTPFMVNPYPFFSFGTADTLDYAVFQPNKGIYDRATGKIYTNL FDELMDAAYSAMKKLDTRFEDVEIVIGETGWPSAGDPNQLGVGWENAVSYNGNLVKHLRSGRGTPLMPNRTFETYVFALFNENLKPSVSEQNYGLFRPDL TAVYDV |
Full Sequence |
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Protein Sequence Length: 324 Download |
MKAVHQALHL ANLTDFIKVT TPHAFSFLAA SRPASTGRFR RFDAAILRPI LDFHLRTRTP 60 FMVNPYPFFS FGTADTLDYA VFQPNKGIYD RATGKIYTNL FDELMDAAYS AMKKLDTRFE 120 DVEIVIGETG WPSAGDPNQL GVGWENAVSY NGNLVKHLRS GRGTPLMPNR TFETYVFALF 180 NENLKPSVSE QNYGLFRPDL TAVYDVGVLR SPQAQSPPAN GRGVPAKSPP SGHKWCVPRS 240 DASDAALQRN IDYVCSSGVD CQPIQKGGAC FNPNTVRAHA SYAMNAYYQR SGRHDSDCDF 300 SRTGFLTSDN PSDQACSFAS MIG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-25 | 234 | 304 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 234 | 318 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-54 | 1 | 206 | 210 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83700.1 | 0 | 1 | 320 | 16 | 325 | hypothetical protein [Vitis vinifera] |
EMBL | CBI23036.1 | 0 | 1 | 318 | 134 | 458 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283647.1 | 0 | 1 | 320 | 138 | 447 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 1 | 312 | 137 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 1 | 318 | 135 | 444 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 1e-34 | 1 | 206 | 113 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3f55_C | 1e-34 | 1 | 206 | 113 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3f55_B | 1e-34 | 1 | 206 | 113 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3f55_A | 1e-34 | 1 | 206 | 113 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3em5_D | 1e-34 | 1 | 206 | 113 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT512949 | 282 | 33 | 312 | 0 |
DW236889 | 312 | 1 | 300 | 0 |
CV715472 | 276 | 37 | 302 | 0 |
CX546589 | 286 | 1 | 276 | 0 |
DV133815 | 269 | 43 | 287 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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