| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10005678 |
| Family | CE8 |
| Protein Properties | Length: 223 Molecular Weight: 22979.8 Isoelectric Point: 8.742 |
| Chromosome | Chromosome/Scaffold: 911 Start: 108518 End: 109186 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 3 | 205 | 0 |
| IDNRAKRAAGNSSSAAAVTAVAVRVQADKSAFYNCTIEGGKSALYALAHRQFYSGCKISGSGDLIIGDAAAVIQDSEILVSGGGAVTAQGRAERYETTGF VLQNCTVKGIGGGEIVLGRPWRKRSRAVVMESYLGGNVAAEGWKVTAVGGAGGGEVAPAEEKYYYAEFGNYGPGSGTDKRVRGPKVLNKDGSDAVQYGPS LFI | |||
| Full Sequence |
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| Protein Sequence Length: 223 Download |
| MSIDNRAKRA AGNSSSAAAV TAVAVRVQAD KSAFYNCTIE GGKSALYALA HRQFYSGCKI 60 SGSGDLIIGD AAAVIQDSEI LVSGGGAVTA QGRAERYETT GFVLQNCTVK GIGGGEIVLG 120 RPWRKRSRAV VMESYLGGNV AAEGWKVTAV GGAGGGEVAP AEEKYYYAEF GNYGPGSGTD 180 KRVRGPKVLN KDGSDAVQYG PSLFIQGDEW IAQAGVPFRG GL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02217 | PLN02217 | 9.0e-41 | 30 | 222 | 205 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 6.0e-41 | 30 | 222 | 201 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-43 | 30 | 222 | 207 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 2.0e-46 | 30 | 222 | 207 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-48 | 30 | 208 | 193 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002314364.1 | 1.4013e-45 | 13 | 222 | 355 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516193.1 | 0 | 13 | 222 | 380 | 592 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| RefSeq | XP_002519324.1 | 8.40779e-45 | 22 | 222 | 362 | 567 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| RefSeq | XP_002525673.1 | 0 | 7 | 222 | 353 | 570 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| RefSeq | XP_002528621.1 | 8.96831e-44 | 22 | 222 | 361 | 566 | Pectinesterase-4 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 2e-35 | 13 | 222 | 101 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 6e-32 | 13 | 222 | 105 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.00000006 | 5 | 184 | 114 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000006 | 5 | 184 | 114 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000008 | 5 | 184 | 114 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JG080890 | 208 | 30 | 222 | 5.99756e-43 |
| JG078228 | 208 | 30 | 222 | 7.00649e-43 |
| JG079147 | 208 | 30 | 222 | 1.99965e-42 |
| JG078587 | 208 | 30 | 222 | 3.00018e-42 |
| JG077463 | 208 | 30 | 222 | 7.00005e-41 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Linum usitatissimum | Lus10020313 | ||||
| Ricinus communis | 30072.m000929 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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