Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005871 |
Family | GH3 |
Protein Properties | Length: 608 Molecular Weight: 66252.7 Isoelectric Point: 5.2906 |
Chromosome | Chromosome/Scaffold: 1158 Start: 83097 End: 86081 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 86 | 321 | 0 |
LESRLGIPIIYGVDAVHGNNCVYGATVFPHNVGLGATRDADLVKRIGAATALEVRASGIQYTFAPCVAVCKDPRWGRCYESYSEDTNIVTNMTSIITGLQ GEPPEGHPLGYPYVAGRNNVVACAKHFVGDGGTHKGLNEGNTICSYEDLERIHMAPYLDCISQGVATIMASYSSWNGRKLHTDRFLLTEVLKDKLGFKGF VISDWEGLNRLSQPRGSNYRHCVASAVNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 608 Download |
MSTPGGCLYK DPNEPVEVRV KDLLSRMTLQ EKLAQMIQLD RVVADAHYLR DLAVGSVLST 60 GGSAPFENAL TSDWADMVDG FQKLALESRL GIPIIYGVDA VHGNNCVYGA TVFPHNVGLG 120 ATRDADLVKR IGAATALEVR ASGIQYTFAP CVAVCKDPRW GRCYESYSED TNIVTNMTSI 180 ITGLQGEPPE GHPLGYPYVA GRNNVVACAK HFVGDGGTHK GLNEGNTICS YEDLERIHMA 240 PYLDCISQGV ATIMASYSSW NGRKLHTDRF LLTEVLKDKL GFKGFVISDW EGLNRLSQPR 300 GSNYRHCVAS AVNAGIDMVM VGRKYEQFVD DIISLATSGE ISTARIDDAV ERILRVKFIA 360 GLFEHPFADR SLLEIVGCKL HRDLAQEAVR KSLVLLKNGK DSNKPLLPLD KNARKILVAG 420 THADNLGYQC GGWTIAWYGL GGRITIGTTI LDAVRKAVGE NTEVIFEEYP SPETLARKDF 480 SYAIVAIGEP PYAEFTGDDP ELVIQSEGRE IVSLVADRIP TLAILVSGRP LVLEPHLLEK 540 IEALVAAWLP GTEGDGIADV IFGGEDFKGQ LPVTWFKKVD QLPMKFDGGI NNVYDPLFPL 600 GFGLTYK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-29 | 15 | 576 | 614 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-42 | 393 | 606 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-75 | 20 | 606 | 659 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 1.0e-83 | 28 | 356 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 1.0e-84 | 27 | 435 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 7 | 607 | 3 | 633 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_190284.1 | 0 | 7 | 607 | 8 | 606 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002279757.1 | 0 | 7 | 606 | 115 | 713 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 7 | 605 | 6 | 595 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 7 | 605 | 4 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 8 | 605 | 4 | 598 | A Chain A, Crystal Structure Of A Response Regulator From Myxococcus Xanthus |
PDB | 1x38_A | 0 | 8 | 605 | 4 | 598 | A Chain A, Crystal Structure Of A Response Regulator From Myxococcus Xanthus |
PDB | 1lq2_A | 0 | 8 | 605 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 8 | 605 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 8 | 605 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 356 | 135 | 487 | 0 |
HO784016 | 428 | 55 | 481 | 0 |
EL455042 | 314 | 62 | 375 | 0 |
FC882555 | 290 | 135 | 424 | 0 |
EX132989 | 299 | 55 | 353 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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