CAZyme Information

Basic Information
SpeciesLinum usitatissimum
Cazyme IDLus10005946
FamilyGH18
Protein PropertiesLength: 435 Molecular Weight: 49410.1 Isoelectric Point: 7.8794
ChromosomeChromosome/Scaffold: 422 Start: 133280 End: 135304
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181094251.2e-31
  YPVLGYITPWNSKGYEIAKKFADKFTHVSPVWYDLKSQGSGLVLEGRHNADRSWISELRENGHALVLPRVVLEAFPQELLKKKKLRNRAIELIVTECMEM
  EYDGIVLESWSRWAGYGVLHDPDMRNKALQFVKKLGDKLHSVSSLRNNKQPLQLVYVIGPPSSEQLQTHDFGPNDLRSLISAVDGFSLMTYDFSNPQNPG
  PNAPLKWIQRTLQLLLDPANNAQSLAPKIFLGLNFYGNDFSLSGGGGAILGRDYLSLLDKHKPQLQWEPKSAEHFFVYVDDDGKRHAVFYPTFPSISVRL
  EEARTWGTGISIWEIGQ
Full Sequence
Protein Sequence     Length: 435     Download
MAKKRNVRQA ANTSHSRTKR VDEPTPGNQF SEASSSDRRL LAIFFVFFVA IPAISVLLYR    60
FKFAPALPDL SESIEQKQEA RFKVDLNYHD ILEENSKVSE NGSQRHYEYP VLGYITPWNS    120
KGYEIAKKFA DKFTHVSPVW YDLKSQGSGL VLEGRHNADR SWISELRENG HALVLPRVVL    180
EAFPQELLKK KKLRNRAIEL IVTECMEMEY DGIVLESWSR WAGYGVLHDP DMRNKALQFV    240
KKLGDKLHSV SSLRNNKQPL QLVYVIGPPS SEQLQTHDFG PNDLRSLISA VDGFSLMTYD    300
FSNPQNPGPN APLKWIQRTL QLLLDPANNA QSLAPKIFLG LNFYGNDFSL SGGGGAILGR    360
DYLSLLDKHK PQLQWEPKSA EHFFVYVDDD GKRHAVFYPT FPSISVRLEE ARTWGTGISI    420
WEIGQGLDYF YDLL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_185.0e-10111425344+
COG3858COG38582.0e-19185434260+
smart00636Glyco_182.0e-28111425355+
cd02874GH18_CFLE_spore_hydrolase2.0e-29111434346+
cd02876GH18_SI-CLP2.0e-157107434333+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI40499.107843476435unnamed protein product [Vitis vinifera]
GenBankEEC71106.106543465435hypothetical protein OsI_02892 [Oryza sativa Indica Group]
RefSeqNP_192013.106243457430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.106843430399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.107643471432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A09143461393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B09143461393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.0000005253423137308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.0000005253423137308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Transmembrane Domains
StartEnd
4059
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY27458238213790
EY6662432611744310
DY27271430783140
EG6581512611423990
EG658151303984248.1
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny