| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10006462 |
| Family | GH5 |
| Protein Properties | Length: 574 Molecular Weight: 63924.1 Isoelectric Point: 7.1116 |
| Chromosome | Chromosome/Scaffold: 743 Start: 211348 End: 213797 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 46 | 355 | 7.10038e-42 |
| EATGRRVKLACVNLASHLEPMVAEGLNRLPINVIAQKITSMGFNCVRLTWPLYLVTNATLGSITVRQSFRRLQLLEPIRGIQAHNPWIIDVSLLQAFKEV VRKLGENNVMVVLDNHVTKPGWCCRDYDGNGFFGDEYFSPDLWVEGLTRMATMFKGSRNVVAMSLRNELRGPKQNSNDWYRYMTRGAEAVHTANPDVLVI LSGLNYDGDLSFLNVEPVKLTFSKKLVFEVHWYGFTDGDGWKNGNPNQVCGLVIDHLRKSAGFVLDKEYPLFVSEFGIDQSGGNVNDDRFINCFLGYAAE LDLDWAVWTV | |||
| Full Sequence |
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| Protein Sequence Length: 574 Download |
| MAKNQLRNHS LVVSLLLIFI SSSSISHIRE VSALPLSTES RWIVDEATGR RVKLACVNLA 60 SHLEPMVAEG LNRLPINVIA QKITSMGFNC VRLTWPLYLV TNATLGSITV RQSFRRLQLL 120 EPIRGIQAHN PWIIDVSLLQ AFKEVVRKLG ENNVMVVLDN HVTKPGWCCR DYDGNGFFGD 180 EYFSPDLWVE GLTRMATMFK GSRNVVAMSL RNELRGPKQN SNDWYRYMTR GAEAVHTANP 240 DVLVILSGLN YDGDLSFLNV EPVKLTFSKK LVFEVHWYGF TDGDGWKNGN PNQVCGLVID 300 HLRKSAGFVL DKEYPLFVSE FGIDQSGGNV NDDRFINCFL GYAAELDLDW AVWTVAGSYY 360 LGEGVVGMSE PYGLLNSDWV EIRNTAFLEK LSALQRPFQG PGLEEVKLHK VIFHPSTGLC 420 VHRGRTDSEP LKLGPCSRSD PWSYDKKTLS VMGTHLCLMA QQLSKPAQIQ LEYCPTWEMI 480 TDSGMHLSSK LQDGTPVCLD VDSNNNSDIV TSPCKCLKAE DTKCDPGSQW FKLVDSTRRG 540 NGKGLPSGTN RLTRGGFSSG RSLLWEFLSL ALA* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00161 | RICIN | 0.001 | 410 | 514 | 119 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00150 | Cellulase | 9.0e-18 | 75 | 354 | 285 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_172772.2 | 0 | 33 | 538 | 32 | 537 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002285424.1 | 0 | 28 | 537 | 21 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312657.1 | 0 | 29 | 568 | 5 | 541 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 33 | 538 | 2 | 506 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 30 | 571 | 28 | 566 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0000000001 | 38 | 322 | 8 | 284 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0000000001 | 38 | 322 | 8 | 284 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000000006 | 38 | 322 | 8 | 284 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000000006 | 38 | 322 | 8 | 284 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 2zun_C | 0.001 | 52 | 396 | 61 | 407 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
