Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10006733 |
Family | GH35 |
Protein Properties | Length: 855 Molecular Weight: 94481 Isoelectric Point: 4.842 |
Chromosome | Chromosome/Scaffold: 204 Start: 54351 End: 58480 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 34 | 350 | 0 |
LVIDGKRRVLQSGSVHYPRTTPEMWPEIIRKSKEGGLDVIETYVFWNYHEPTRGQYYFEGRYDLVKFLRTVQEAGLMAHLRIGPYACAEWNYGGFPMWLH FLPGIQFRTTNSVFQSEIQRFLEKIVDMMNGENLFASQGGPIILAQVENEYGNVEWAYGLPGRDYVRWAAETALSLNVSVPWVMCQQSDAPDPIINTCNG FYCDQFTPNSPSKPKFWTENYPGWYVTFGSPIPRRPVEDVAFAVARFFENGGTLQNYYMASASSLWNGGSCSYFGGTNFGRTAGGPMIATSYDYDAPIDE YGFTRQPKWGHLRDLHQ |
Full Sequence |
---|
Protein Sequence Length: 855 Download |
MGRKVELLAL CLLLVVFQFE KAKCFSVSYD NRALVIDGKR RVLQSGSVHY PRTTPEMWPE 60 IIRKSKEGGL DVIETYVFWN YHEPTRGQYY FEGRYDLVKF LRTVQEAGLM AHLRIGPYAC 120 AEWNYGGFPM WLHFLPGIQF RTTNSVFQSE IQRFLEKIVD MMNGENLFAS QGGPIILAQV 180 ENEYGNVEWA YGLPGRDYVR WAAETALSLN VSVPWVMCQQ SDAPDPIINT CNGFYCDQFT 240 PNSPSKPKFW TENYPGWYVT FGSPIPRRPV EDVAFAVARF FENGGTLQNY YMASASSLWN 300 GGSCSYFGGT NFGRTAGGPM IATSYDYDAP IDEYGFTRQP KWGHLRDLHQ AIKQCEDYLV 360 TSDPTHQSLG YNLEAHVYCK SSADCAAFLA NYGSSSDANV TFNGNTYSLP AWSVSILPDS 420 KNVVFNTATI TTQRSVHDSP LDSNTTRFEM SLETSVWSWY KEQIGISGNN SFTAHGLLEH 480 INTTEDTSDF LWYSTSFMNS GQATDGLLNI ESLGQAALVF LNKNRIEFGF GSHNIPGFSL 540 SQKVALVGGN NTLDILSMMV GVQNYGPWFD VQKAGLLAVI LADFHNGINN LGSGDWNYQV 600 GLEGEHLGLE DVNASYSSLW SQGNDMPVSD SLIWYKTTFS SPQGEGPLVL DLASMGKGEA 660 WVNGESIGRY WSTYLSPSTG CNEACDYRGP KDETTCLTKC GQPSQTLYHV PRAWVHPGDN 720 LLVLREELGG DPRQITVLSH TGQEICSVIS EKDPPPPESW RPNMGFASQS PEVRLKCEQG 780 WHITSINFAA FGDPQGECGS FRPGGSCHAD MLSVVQNACI GQEGCSVPLS MAAASLTGPC 840 PGVSKRFVVE ALCS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 7.0e-5 | 49 | 185 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 4.0e-12 | 775 | 853 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-21 | 27 | 188 | 173 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-148 | 33 | 352 | 335 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 854 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24373.1 | 0 | 3 | 854 | 5 | 861 | unknown [Picea sitchensis] |
DDBJ | BAD20774.2 | 0 | 2 | 854 | 10 | 851 | beta-galactosidase [Raphanus sativus] |
EMBL | CBI16297.1 | 0 | 26 | 854 | 25 | 846 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002317239.1 | 0 | 1 | 854 | 6 | 848 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521428.1 | 0 | 1 | 854 | 1 | 840 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-40 | 33 | 348 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8e-37 | 23 | 357 | 7 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8e-37 | 23 | 357 | 7 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 8e-37 | 23 | 357 | 7 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |