| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10007210 |
| Family | GH5 |
| Protein Properties | Length: 411 Molecular Weight: 44917.8 Isoelectric Point: 6.1432 |
| Chromosome | Chromosome/Scaffold: 674 Start: 180331 End: 182025 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 50 | 369 | 2.1e-32 |
| KNGKPVYLNGFNAYWMIMLAAQESTRGQVTSAFEAASKVGMNVVRTWAFNDGAGGLQVSPGVYDENVFKGLDFVISEAGKFGINVILGLVNNFKDLGGRT QYVAWAKERGQAISGDDDFYTNPVIRGYYKNHVNVVLTRVNTITGVAYKDDPTIFAWELMNEPRSMDFSGALVQNWVSEMAAYLKSIDGCHLLEVGLEGF YGPSNQNLNPNNWPFGTDFLSNNQIPFIDFATTHLYADLWLLNSTETQIEAYVDKFLESRIQDCNTVIRKPLVMGEFGKSFKQPGYSLAVRDAYYSKIYN SIYNSSKKGGSFAGGIFWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 411 Download |
| MGTSTQHKSI VAATGMLLIL TQCGFIGTAA SPTGSCNGSI AKANGTRFMK NGKPVYLNGF 60 NAYWMIMLAA QESTRGQVTS AFEAASKVGM NVVRTWAFND GAGGLQVSPG VYDENVFKGL 120 DFVISEAGKF GINVILGLVN NFKDLGGRTQ YVAWAKERGQ AISGDDDFYT NPVIRGYYKN 180 HVNVVLTRVN TITGVAYKDD PTIFAWELMN EPRSMDFSGA LVQNWVSEMA AYLKSIDGCH 240 LLEVGLEGFY GPSNQNLNPN NWPFGTDFLS NNQIPFIDFA TTHLYADLWL LNSTETQIEA 300 YVDKFLESRI QDCNTVIRKP LVMGEFGKSF KQPGYSLAVR DAYYSKIYNS IYNSSKKGGS 360 FAGGIFWQLL NPGMDNWGDG YQIVLQNSPS TASIIAQQSE RLSTLPAAIS * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.003 | 87 | 211 | 143 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG2730 | BglC | 0.0003 | 89 | 287 | 211 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 0.0002 | 51 | 327 | 286 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 2.0e-23 | 48 | 342 | 305 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC08442.1 | 0 | 42 | 405 | 46 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
| GenBank | EEC71222.1 | 0 | 42 | 410 | 39 | 414 | hypothetical protein OsI_03157 [Oryza sativa Indica Group] |
| Swiss-Prot | Q0JKM9 | 0 | 42 | 410 | 39 | 414 | MAN1_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 1; AltName: Full=Beta-mannanase 1; AltName: Full=Endo-beta-1,4-mannanase 1; AltName: Full=OsMAN1; Flags: Precursor |
| RefSeq | XP_002302695.1 | 0 | 13 | 408 | 9 | 406 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515142.1 | 0 | 17 | 405 | 12 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 37 | 405 | 3 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 9.94922e-44 | 49 | 394 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 9.94922e-44 | 49 | 394 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 9.94922e-44 | 49 | 394 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 9.94922e-44 | 49 | 394 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
