| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10007612 |
| Family | AA6 |
| Protein Properties | Length: 245 Molecular Weight: 26014.7 Isoelectric Point: 5.9449 |
| Chromosome | Chromosome/Scaffold: 121 Start: 61607 End: 63221 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA6 | 46 | 236 | 0 |
| YYSMYGHVEKLAEEIKKGASSVEGVEVKLWQVAETLPEEVLGKMGAPAKKNDVPIITANDLQEADGILFGFPTRFGMMAAQFKAFMDSTGGLWRTQALQG KPAGIFYATGSQGGGQETTPLTAITQLVHHGMVFVPVGYTFGAGMFEMEQVKGGSPYGAGTFAGDGTRQPTELELGLAHHQGQYFAGIAKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 245 Download |
| MTNAILLAVL SLSFEPLVSY ESSKRKLDGD IGPDQRLLHA LAPPNYYSMY GHVEKLAEEI 60 KKGASSVEGV EVKLWQVAET LPEEVLGKMG APAKKNDVPI ITANDLQEAD GILFGFPTRF 120 GMMAAQFKAF MDSTGGLWRT QALQGKPAGI FYATGSQGGG QETTPLTAIT QLVHHGMVFV 180 PVGYTFGAGM FEMEQVKGGS PYGAGTFAGD GTRQPTELEL GLAHHQGQYF AGIAKKMKGP 240 SADA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 1.0e-15 | 46 | 176 | 141 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 5.0e-17 | 54 | 184 | 131 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 7.0e-44 | 46 | 239 | 200 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 7.0e-65 | 46 | 237 | 195 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 6.0e-79 | 46 | 239 | 195 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050662 | coenzyme binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD38143.1 | 0 | 46 | 241 | 9 | 203 | AF139496_1 unknown [Prunus armeniaca] |
| GenBank | ACU19740.1 | 0 | 46 | 241 | 12 | 206 | unknown [Glycine max] |
| EMBL | CAD31838.1 | 0 | 46 | 239 | 10 | 202 | putative quinone oxidoreductase [Cicer arietinum] |
| RefSeq | XP_002316697.1 | 0 | 46 | 241 | 9 | 203 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518592.1 | 0 | 46 | 239 | 9 | 201 | Flavoprotein wrbA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 46 | 239 | 7 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 46 | 239 | 7 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 46 | 239 | 8 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 46 | 239 | 8 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 46 | 239 | 8 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
